Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01402 GTCTCTTCTCATAGCACGCGCCAAATCCCTCCACCTTCACAACCACCACACGCGCCACCGCGTCTCTTCTTCTTCGTCTTCAACCTCAACCCCCCTCTTCAATTTTCACCCTTTGCTTTCCTCCCGGCGCCACGCGCCCTCGCTCATCCCCACGCGCCTCTTCTCCAGCTACTACTCCCTCGAACAGCATCATCTACGGTGGCCAATGTGGATGAGTGGAAATGGAAACTCAGCATGCTGTTACGGAATGATAAGGACCAGGAGATTGTATCCAGAGACAGAAAAGATAGGAGAGACTATGAACAAATAGCTAACCTTGCAAAAAGAATGGGGCTTTACAGTGAGCTTTTTGGAAAAGTGGTTGTTGCAAGCAAGGTACCTCTCCCTAACTACCGTCCAGATTTGGATGACAAACGTCCACAAAGAGAGGTAGTGATTCCACTAAGCTTGCAAAGGAGAGTTGAGGGTTTGTTGCAGGAATACCTTGATAGACTTCAGTTGAATTCTGCTAAGATAACTGACAGCCTGGATGATGGGAGCTCCAACAATCAAGTTAAAGATGTAGAAATGGATGAAAATGCTGATTCATTTGTGGACGAATCTGTTATGGAAAAGGTTCTCCAGAAGAGGAGTTTGAGGATGCGTAATATGCAAAGAGCTTGGCAGGAATCACCTGAGGGCAGGATGATGCTGGAATTCCGGAAGTCTCTACCATCATTCAAGGAGAAGCAAGGTTTACTTCAAGCTATAGCACATAATCAGGTGATAGTTATCTCTGGAGAGACTGGCTGTGGTAAAACCACACAACTTCCTCAGTATGTTTTAGAATCAGAGATAGAGTCTGGTCGTGGAGCATTTTGTAGCATTATTTGCACACAGCCTCGAAGGATCTCTGCTATGGCAGTGGCAGAGAGAGTGTCAGCAGAGCGAGGAGAGCCTCTTGGTGAAACAGTTGGCTTCAAAGTTCGATTAGAAGGAATGAAAGGAAAAAACACCCATCTGCTATTTTGTACCAGTGGTATATTACTTAGGAGGTTGTTGAGTGATCGAAACCTGAATGGCATAACCCATGTTTTTGTGGATGAAATTCATGAAAGAGGCATGAATGAAGATTTCTTACTGATTGTGTTAAAGGACCTGCTTCCACGTCGTCGGGATTTAAGATTGGTTTTAATGAGTGCTACCTTAAATGCTGAGCTTTTTTCAAATTATTTTGGAGCTGCTCCTACATTTCATATTCCGGGTTTCACCTATCCAGTTAGAGCACACTTTTTAGAAGATATTTTGGAAATGACTGGATATAAATTGACTTCCTTCAACCAAATTGATGATTACGGTCAAGAGAAATTGTGGAAGACACAAAAGCAACTGGCACCACGGAAGAGGAAAAACCAGATTACTGCTCTTGTTGAGGATGCTCTTTCTAAATCAAACTTTGAGAACTATAGCTCCAGGGCACGGGATTCACTAGCATCTTGGTCACCTGATTGCATAGGGTTTAATCTCATTGAGGCTGTTCTATGCCATATATGTCGGAAAGAACGACCAGGTGCTGTCTTAGTGTTTATGACTGGGTGGGAGGATATAAGCTCTTTAAGAGATCAGCTTAAAGCACATCCTCTTTTAGGAGATCCCAATAGGATTCTTCTTCTAACATGTCATGGTTCAATGGCAACATCAGAACAGGTTGGTTATTTCCATTGCCGATTCCCTGGTTGTCATAGACCACCTCCAAATATAAGGAAAGTGATACTTGCTACAAATATGGCCGAGGCAAGTATTACGATCAACGACATTAGAAGGGGTAGGGCTGGTCGTGTGCAGCCAGGAGAATGTTACCACCTTTACCCCAAATGTGTTTATGAAGCCTTTTCTGAATATCAACTTCCTGAGCTACTGAGAACTCCTTTGAACTCTCTTTGCCTGCAAATAAAAAGTTTGCAGGTTGAGAGTATTGGAGAGTTCTTATCAGCAGCTTTACAAGCTCCAGAGCCACGG 1998 0.4374 VSSHSTRQIPPPSQPPHAPPRLFFFVFNLNPPLQFSPFAFLPAPRALAHPHAPLLQLLLPRTASSTVANVDEWKWKLSMLLRNDKDQEIVSRDRKDRRDYEQIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNSAKITDSLDDGSSNNQVKDVEMDENADSFVDESVMEKVLQKRSLRMRNMQRAWQESPEGRMMLEFRKSLPSFKEKQGLLQAIAHNQVIVISGETGCGKTTQLPQYVLESEIESGRGAFCSIICTQPRRISAMAVAERVSAERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGAAPTFHIPGFTYPVRAHFLEDILEMTGYKLTSFNQIDDYGQEKLWKTQKQLAPRKRKNQITALVEDALSKSNFENYSSRARDSLASWSPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISSLRDQLKAHPLLGDPNRILLLTCHGSMATSEQVGYFHCRFPGCHRPPPNIRKVILATNMAEASITINDIRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGEFLSAALQAPEPR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01402 666 SMART ultradead3 235 428 IPR014001 -
Pste1g01402 666 CDD DEXHc_RHA-like 253 413 - -
Pste1g01402 666 Gene3D - 600 627 IPR027417 -
Pste1g01402 666 Gene3D - 500 599 IPR027417 -
Pste1g01402 666 Pfam DEAD/DEAH box helicase 247 398 IPR011545 GO:0003676|GO:0005524
Pste1g01402 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 649 IPR027417 -
Pste1g01402 666 CDD SF2_C_RHA 491 616 - -
Pste1g01402 666 Gene3D - 185 415 IPR027417 -
Pste1g01402 666 PANTHER ATP-DEPENDENT RNA HELICASE 600 664 - -
Pste1g01402 666 FunFam DExH-box ATP-dependent RNA helicase DExH3 190 415 - -
Pste1g01402 666 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 247 414 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01402 Pste-Chr1 4444783 4457709 Transposed