Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01353 AAGCAGAAGCTTGGTCCTAGAAGCCTAATCCAAAACCCCTTTGTGTCTTTATTTATCCAAGTGGTCTCTCTCTATCCATTGGAAGAGGAGATGGCACCAAAACCAGTTTCCCTTTCGCATTTACTCCTCCTTTTAATATTGTTTCTTGCCATCCAACTTTCTGAGCAGTTAGAGTTTTCTCAGTCTCAAACACTTCTCAAGGTTCAGCAACTTCTTGGCTATCCATCAGCACTAGGTGCTCTAAGCAGCACCTCAGACTTTTGCAGCATTGAGCCTACCCCATATTTGACACTAGGCTGCTATGAGGATAGCTTGACACAGCTGCATGCTGTTGGAAACAATGAGTTTAACACATTGCCTCAAAACTTCTCTTCAGACACTCTCTTTGCTACACTAGGCAGTTTATCAAGTTTGAAAGTTTTGTCTTTGGTTTCTCTGGGACTCTGGGGGAGCTTACCTGAAAGCATTGCTCAAATGTCTTCATTGGAAATACTTAACATTAGCTCTAATCACTTCAGTGGAGCCATTCCTTCTCAGCTTTCACATCTGAGGAACCTCCAGTCAGTGGTGCTTGATGATAATGACTTCAATGGTGAAATTCCCAACTGGGTAGGCTCACTTCAAGGTTTGGCTGTGCTTAGTATGAAGAACAACTGGTTTAGTGGGAGCCTGCCAACTTCATTGGATGCTCTTCATACATTGAGGGTGTTAGATCTATCAAATAATCAGTTATCTGGGGAACTTCCTCATCTTAAGAAATTGGCAAACCTTCAATTGGTTTCCCTTGTGCTTAGAAATAACAGCTTCAGGTTAAGTGTTCCTTCTGATTTAAGTTCTTTCTATCTGCTCCAGAAGCTAGACCTTTCATGGAATAATTTTGTAGGGCCATTTCCACCATCCTTGTTGTCACTGCCTTCCATCAATTATCTTGATATTTCTTCAAATAAATTCACTGGAATGCTTTTCAATAACATGTCATGCAATGATGATCTCCACTTTGTAAATTTATCTTCAAATCTTCTGAAAGGAGAACTTCCCACTTGTTTAGAACCAAAGACCAGGGATGTTCTGTATGCTAGAAACTGCTTTTCAAATAAGAACCATGATCAGCACCCTTCAGATTTCTGCAGCAATGAGGCTTTGGCGGTGACAATCATACCCCATCAACAGAAGCACAAGAGAACAACTAGTAAAGCAGTTATTGTATCAAGTATGGGAGGTCTTGTTGGTGTAATGTTGATTATAGGAGTGGTTATCTTGGTTGTTAGCCAAGTTCATAAGAAACAAGTAGTGAAAATACCGTCAAAGCCCACTTTGGAGGATGTTATCAGCCAGGAACATAATGAAGAGGAAGTGAAAACTACTAAAAAGTCCATAATGGAGCATATCATCAAAAGGGTTCCTGACAAACACTCTGTGGAAACACTAACAAGATCCATAAAGGAGCATGTCATGAGCCGAATGAATAACAAGCGTGTCATGAGGGCATCGACAAGGTCCATAATAGAACATGTATCATCAGCAAACACAGCAAAACTACTCACAGATGCAAGGTATATATCAGAAACAATGAAGATGGGAGCCAGCCTTCCTGCTTATAGGACCTTTGCTTTGGATGAACTTAAGGAAGCTACAAACAGTTTTGATGCATCATGTTTCATAAGTGAAGGTCCCCATGGTCAGATTTATAAAGGGGTGCTCTCTGATGGAATGAATATTGCTGTTAGAGGCTTGAAAATGAGAAAGAGACATGGCCCTCAAACTTACATGCACCATGTTGAGTTGATTTCAAAACTAAGGCATTCACACTTGGTTAGTGCTCTTGGGCATGCTTTTGAGTGCAACCAGGATGATTCATGTGTGAACAATGTTTATCTCATATTTGAGTTTGTTCCAAATAAAAGTTTAAGAAGCTGCGTTTTAGGATCTTCTGGGGAAAAGCTTTCTTGGACTCAGAGAATATCAGCTGCAATTGGAGTGGTTAAAGGCATTCAATTTTTGCACACAGGGATAGTGCCTGGACTATATTCAAATAATCTGAAAATAACAGATATTCTTTTGGATAACAATCATAATGTTAAAATAAGCAGTTATAATCTGCCACTCTCTACTGAAAATAAAAGAATGATCAGCAATGGAACTTCCACTAGTTTAAAAGGAAACGTCCAAGCAAGGATAAAGGATGAAGACAAGAATGATGTCTATGATATTGGTGTAATCTTGCTAGAAATCATTCTGGGACGACCAATAATGTTCCACAATGAAGTTGGAACACTAAAAGATCTTTTACAGGTAAGCATCAAAACTGATGACATAGCTAGAAGGAGTATTGTTGACCCAGCAGTTCACAAGGAATGTTCAGATGAATCACTAATGACAATGATGGAGATATGTGTAAGGTGTCTCTCAAATGACCCAATCGAAAGGCCTTCTGTAGAAGATATTCTCTGGAATTTGCAGTTTGCAGCACAAGTTCAGAATTCATGGAGAAGAGACTCAAGTGATCACAGTTACTCACCTGCACCATCCTCCAGGGAGACATGAGATTTGTATAAAAAAACTAATAGGGTGTATGTTGCCATGTACAAAAGTTTAATTTTATAGTATTATTGCACAATTTTATAATCCTCTATAAGAATTCAGTGTGTATGTGTGATTAAAATTTTCCCTCTAATATTTATCTTTTCCTTTTGTTTTGGTTCATATTTAAT 2711 0.388 KQKLGPRSLIQNPFVSLFIQVVSLYPLEEEMAPKPVSLSHLLLLLILFLAIQLSEQLEFSQSQTLLKVQQLLGYPSALGALSSTSDFCSIEPTPYLTLGCYEDSLTQLHAVGNNEFNTLPQNFSSDTLFATLGSLSSLKVLSLVSLGLWGSLPESIAQMSSLEILNISSNHFSGAIPSQLSHLRNLQSVVLDDNDFNGEIPNWVGSLQGLAVLSMKNNWFSGSLPTSLDALHTLRVLDLSNNQLSGELPHLKKLANLQLVSLVLRNNSFRLSVPSDLSSFYLLQKLDLSWNNFVGPFPPSLLSLPSINYLDISSNKFTGMLFNNMSCNDDLHFVNLSSNLLKGELPTCLEPKTRDVLYARNCFSNKNHDQHPSDFCSNEALAVTIIPHQQKHKRTTSKAVIVSSMGGLVGVMLIIGVVILVVSQVHKKQVVKIPSKPTLEDVISQEHNEEEVKTTKKSIMEHIIKRVPDKHSVETLTRSIKEHVMSRMNNKRVMRASTRSIIEHVSSANTAKLLTDARYISETMKMGASLPAYRTFALDELKEATNSFDASCFISEGPHGQIYKGVLSDGMNIAVRGLKMRKRHGPQTYMHHVELISKLRHSHLVSALGHAFECNQDDSCVNNVYLIFEFVPNKSLRSCVLGSSGEKLSWTQRISAAIGVVKGIQFLHTGIVPGLYSNNLKITDILLDNNHNVKISSYNLPLSTENKRMISNGTSTSLKGNVQARIKDEDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLQVSIKTDDIARRSIVDPAVHKECSDESLMTMMEICVRCLSNDPIERPSVEDILWNLQFAAQVQNSWRRDSSDHSYSPAPSSRET 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01353 847 ProSiteProfiles Leucine-rich repeat profile. 233 255 IPR001611 GO:0005515
Pste1g01353 847 Gene3D Phosphorylase Kinase; domain 1 508 630 - -
Pste1g01353 847 SUPERFAMILY L domain-like 119 362 - -
Pste1g01353 847 Pfam Leucine rich repeat 184 244 IPR001611 GO:0005515
Pste1g01353 847 Gene3D Ribonuclease Inhibitor 100 381 IPR032675 -
Pste1g01353 847 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 522 630 - -
Pste1g01353 847 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 257 381 - -
Pste1g01353 847 ProSiteProfiles Protein kinase domain profile. 548 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01353 847 Gene3D Transferase(Phosphotransferase) domain 1 631 839 - -
Pste1g01353 847 FunFam Leucine-rich receptor-like protein kinase family protein 152 250 - -
Pste1g01353 847 SUPERFAMILY Protein kinase-like (PK-like) 527 821 IPR011009 -
Pste1g01353 847 Pfam Protein kinase domain 555 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01353 847 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 111 833 - -
Pste1g01353 847 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 631 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01353 Pste-Chr1 4288329 4293595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01353 74 844 Miscellaneous Gene Families AT3G03770 49.005 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pste1g01353 Pkinase 1.1e-16 CL0016