Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g01231 | ATGCAGACAACCTTTCACTCTTGTGATTTGAGCTCAAGCAAACATCGAGAAATGCCTCCGGACAAGAATGCTAATCATCAGCAAACCCATTATGAGGTTCTCAAGGTCAAAGAAGATGCAAACTATGAAGAAATTCGAGCTAGCTACCGTAGCGCTCTACTCAGTTTACATCCTGATAAGCTATTGATTACGTCTGAGACATCCAACAGTAATCAAGCAACTGGGGAGGGATTTCTAAAAGTACAAAAGGCATGGGAAATTTTGAGTAATTCAAGTTCCCGTTCATTTTATGATAATGAGCTGCGAAGTTCAAGGCACGATTGCTTGGCTGCTGAAGTTGCTGAAGATTTGAGCTTACAGGATATGTTAATTCAAGATGATGGAGAAACATTAGAACTTTTTTATCAATGCCGATGTGGTGATTACTTCTCCGTAGACTCCATGGAATTGAAGAAAATGGGATATTCCTTATTGAGGGAGGCAAGTGGGATACGTGCACTTAATGCTGATACTTTACCAGGATCAGTGATACTTCCATGTGGATCTTGCATAAGAAATATGAAAGCAAGAAATGATGATGGAAGACAATACCTGTCGGCAATACGGAGTGGAACAGTTGCTGCATTTTCTAGTGAAGGATGTGGTGACTCTTCCATCCACCGACAAACCAAAGCTAGCATGCTGGCATTACCATTTACAAGTGTTGACAAAGGGACTAAATTAAACAATCAACTTAGCTGA | 741 | 0.4049 | MQTTFHSCDLSSSKHREMPPDKNANHQQTHYEVLKVKEDANYEEIRASYRSALLSLHPDKLLITSETSNSNQATGEGFLKVQKAWEILSNSSSRSFYDNELRSSRHDCLAAEVAEDLSLQDMLIQDDGETLELFYQCRCGDYFSVDSMELKKMGYSLLREASGIRALNADTLPGSVILPCGSCIRNMKARNDDGRQYLSAIRSGTVAAFSSEGCGDSSIHRQTKASMLALPFTSVDKGTKLNNQLS | 246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g01231 | 246 | PANTHER | DPH3 HOMOLOG-RELATED | 29 | 185 | IPR044248 | GO:0017183|GO:0046872 | |
| Pste1g01231 | 246 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Pste1g01231 | 246 | SUPERFAMILY | Chaperone J-domain | 26 | 101 | IPR036869 | - | |
| Pste1g01231 | 246 | Gene3D | DPH Zinc finger | 112 | 196 | IPR036671 | - | |
| Pste1g01231 | 246 | CDD | DnaJ | 29 | 90 | IPR001623 | - | |
| Pste1g01231 | 246 | ProSiteProfiles | DPH-type metal-binding (MB) domain profile. | 113 | 192 | IPR007872 | - | |
| Pste1g01231 | 246 | SUPERFAMILY | CSL zinc finger | 114 | 188 | IPR036671 | - | |
| Pste1g01231 | 246 | PRINTS | DnaJ domain signature | 31 | 49 | IPR001623 | - | |
| Pste1g01231 | 246 | PRINTS | DnaJ domain signature | 73 | 93 | IPR001623 | - | |
| Pste1g01231 | 246 | PRINTS | DnaJ domain signature | 49 | 64 | IPR001623 | - | |
| Pste1g01231 | 246 | SMART | dnaj_3 | 28 | 93 | IPR001623 | - | |
| Pste1g01231 | 246 | Gene3D | DnaJ domain | 13 | 111 | IPR036869 | - | |
| Pste1g01231 | 246 | ProSiteProfiles | dnaJ domain profile. | 29 | 101 | IPR001623 | - | |
| Pste1g01231 | 246 | Pfam | CSL zinc finger | 117 | 183 | IPR007872 | - | |
| Pste1g01231 | 246 | Pfam | DnaJ domain | 29 | 98 | IPR001623 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste1g01231 | 30 | 98 | C2H2 Transcription Factor Family | AT1G74250 | 40.580 | 7.24e-09 | 53.9 |