Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01151 GGTGAGTGTGGTGGCATTTAGAGGCCCCCAAATGAAGAGGTCTCCAGCATCTTCTAGTTCATCAAGTTCTTCTTCTGTTGGGTCTGAAAGAAGGCCTAAGCACCCAAAGAGGAATTTAAAGTCACAAAAATGCAAGCAGAACCAAACCACTGGGAGAAGAAGCTCTATCTATAGAGGAGTTACAAGGCATAGGTGGACAGGGAGGTTTGAGGCACACCTATGGGATAAGAGCTCTTGGAACACTGGTCAGGGCAAAAAGGGACGACAAGGGGCATATGATACTGAAGAAGCTGCAGCCCGTACCTACGACCTTGCAGCACTAAAGTACTGGGGAAACAAGGACCTTGAGGAAATGGACAAGGTTTCAAGAGAAGAATATTTGGCTTCTTTGCGGCGCCAAAGCAGTGGTTTTCTAGAGGCTTATCTAAGTATCGTGGGGTTGCTAGGCATCATCATAATGGCCGCTGGGAAGCTCGCATTGGAAGAGTGTGTGGAAACAAGTACCTCTACTTGGGAACATATAGGTCATTTTCTTTTGCTTGATTTGCACTCAAAAGAAACACAAGAGGAAGCAGCAGTGGCATATGACATGGCAGCAATAGAGTACCGTGGACTCAATGCAGTGACCAATTTTGACATAGCCAATTACATGGACAAAATAAAGAAGAAAAATGACCAAACTCAACAGACAGAAGCACAAACAGAAACAACAGTTCCTAACTCCTCTGACTCTGAAGAAGCAGAAGTAGAACAACAGATAACAGCTACAACAGTAACACCACCTCCATCTGAAAAGCTGCACATGTCCCCAAAGCAGCACCAAGATCTGCCATGGACCTTCATGTACACTGGCATGACTCAGTTTCAAGATCCAGACTTGACTTTCAGCAAATCTGATGAGTTAGCAGGCATGTTTGACGGTGCAGGGTTTGAGGAAGACATTGATGTGCTGTTTAGCACTGAGCCTTGTGAGACTGAGAGTGATATCAATATGAGGAAGTTTTGGAAAGTATTGAGAGAGGAGGCACAAGTGGGGCTGGTGGAAGCATGGTGCATGTGGAGAACAAAAAGCAGGAAAAGATACTGTCATTTACTTCTTCTCCATCATCTACAACAACTACAGTTTCTTGTAACTATGCTCTATGATCTATTATCTCTTCAGTGGGAGTTGGATAAGCTACATGGAATGGAACCTTGTGTAGATTATTGGGTGGTGGATGGGTGTCAACAT 1231 0.4452 MKRSPASSSSSSSSSVGSERRPKHPKRNLKSQKCKQNQTTGRRSSIYRGVTRHRWTGRFEAHLWDKSSWNTGQGKKGRQGAYDTEEAAARTYDLAALKYWGNKDLEEMDKVSREEYLASLRRQSSGFLEAYLSIVGLLGIIIMAAGKLALEECVETSTSTWEHIGHFLLLDLHSKETQEEAAVAYDMAAIEYRGLNAVTNFDIANYMDKIKKKNDQTQQTEAQTETTVPNSSDSEEAEVEQQITATTVTPPPSEKLHMSPKQHQDLPWTFMYTGMTQFQDPDLTFSKSDELAGMFDGAGFEEDIDVLFSTEPCETESDINMRKFWKVLREEAQVGLVEAWCMWRTKSRKRYCHLLLLHHLQQLQFLVTMLYDLLSLQWELDKLHGMEPCVDYWVVDGCQH 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01151 400 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Pste1g01151 400 PRINTS Ethylene responsive element binding protein signature 184 204 IPR001471 GO:0003700|GO:0006355
Pste1g01151 400 MobiDBLite consensus disorder prediction 219 253 - -
Pste1g01151 400 MobiDBLite consensus disorder prediction 1 47 - -
Pste1g01151 400 MobiDBLite consensus disorder prediction 214 260 - -
Pste1g01151 400 SMART rav1_2 46 115 IPR001471 GO:0003700|GO:0006355
Pste1g01151 400 SMART rav1_2 159 208 IPR001471 GO:0003700|GO:0006355
Pste1g01151 400 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Pste1g01151 400 ProSiteProfiles AP2/ERF domain profile. 136 202 IPR001471 GO:0003700|GO:0006355
Pste1g01151 400 Coils Coil 203 223 - -
Pste1g01151 400 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Pste1g01151 400 Gene3D AP2/ERF domain 46 106 IPR036955 GO:0003700|GO:0006355
Pste1g01151 400 Gene3D AP2/ERF domain 155 204 IPR036955 GO:0003700|GO:0006355
Pste1g01151 400 ProSiteProfiles AP2/ERF domain profile. 46 114 IPR001471 GO:0003700|GO:0006355
Pste1g01151 400 MobiDBLite consensus disorder prediction 1 18 - -
Pste1g01151 400 Pfam AP2 domain 46 101 IPR001471 GO:0003700|GO:0006355
Pste1g01151 400 SUPERFAMILY DNA-binding domain 176 203 IPR016177 GO:0003677
Pste1g01151 400 MobiDBLite consensus disorder prediction 32 46 - -
Pste1g01151 400 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01151 Pste-Chr1 3700499 3705638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01151 18 206 AP2-EREBP Transcription Factor Family AT5G57390 46.890 3.52e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste1g01151 AP2 1.6e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01151 1 3700499 3705638 Pste1g01151 1 3700499 3705638 ECH