Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01003 CTATTTCTCTGTCCCCTCTTCTATCCTTTTGGAAATCATCAAAATACTTGTTTGGTATATATGTTAAGTTCTATGGCTCTTTGGAAGAGAAACTCTGAACCCTTTTGTTGCACATAGGAGTAAGTAAGAGTTCTCAGTTCTGCAACAGGATTATTCAGATGGATAACGAATTTGAAGATAGACAAGAAGAAACAGTTTCAGATATGATACCAAACAATCAGCAGAGGAAAAAACAGTCATTTCTATGGAAAGTTTTGGCCATGAGAGAGAGAAATGGAAGGACAATGGAGAGAGGTTCTAATGATTCCCTTGATTCATTTTCTGATTCATCCTTTGACAATCGAGGCTCAGAACCTTCTATGTCTTCTAGTGAAGCAATTCAAAATTTCAGAGTTTTTGCAGCAACATGGAATGTAGGAGGGCAATGCCCCACGGGAAACCTTGATCTGAGTGATTTTCTTCAGGTTCGAAATGAACCAGATATGTATGTTTTGGGATTTCAGGAGATTGTCCCTCTAAATGCTGGAAATGTGCTGGTAATAGAGGATAATGAACCTGCTGCAAAATGGCTTGCATTAATCAACCAATCACTCAATGGTCCTTCAGATTTGGCTTCTAAAGGACTAAAATCACCTGCATCTTTTGGTGGTCCATTATTCTTCCAAAAGCCTTCTCTAAAGAAGATTAAGAAAACTTTCAAAAAACTAAATGGAAAGAGGCTAAAAAGTTGTAACTGTGTTCTTGAAATGGAAAGGAAGGCTGGCAAGGATTTCTGTTTTCGCTGTCAAGAATCAAACTTCAATTCGGATGATTCTTCAACCGAAGATGAGGATGAGAATTTCCCTATTCCTGTTGCCTTGGCTACTAGCCAGATGAAATACAGTCTTGTTGCATGTAAACAAATGGTTGGAATTTTTGTTAGTGTGTGGATGAAGACGGAACTTGTTCAGTATGTAGGTCACTTAAGAATATGCTGCACTAGCCGTGGAATCATGGGATGCCTAGGGAACAAGGGGTGTATATCAGTGAGCATGTCATTTTATCAGACAAGTTTTTGCTTCATCTGTAGTCATTTGGCATCTGGTGAGAAAGAGGGTGATGAGCTTCGCAGGAATCTTGATGTCATAGAAATTCTGAAGAACACTCAGTTTCCAAGGATTTGCAAGACACCACATAGTAGAATGCCCGACAAAATTTTAGATCACGACCGAATCATATGGTTTGGAGACTTGAATTACAGAATTTCTTTGAGCCATGATGATGCAAAAAGGCTTGTGGAAAAGAAGGACTGGCCTGCTCTTTTTAACAAGGATCAGGTATATTGGTGCACTAACCACAGTGACTGCAAAGTGAATAATAAATATAAAAATTTTGCGGTTGATGGTGAAGAAAAGTTTGAAGGTTTTGGAATGCTTCAACAAGAGCTAGGAATTAGTAGATTGAGGAACCAGCTCCTCATGTAA 1463 0.3876 MDNEFEDRQEETVSDMIPNNQQRKKQSFLWKVLAMRERNGRTMERGSNDSLDSFSDSSFDNRGSEPSMSSSEAIQNFRVFAATWNVGGQCPTGNLDLSDFLQVRNEPDMYVLGFQEIVPLNAGNVLVIEDNEPAAKWLALINQSLNGPSDLASKGLKSPASFGGPLFFQKPSLKKIKKTFKKLNGKRLKSCNCVLEMERKAGKDFCFRCQESNFNSDDSSTEDEDENFPIPVALATSQMKYSLVACKQMVGIFVSVWMKTELVQYVGHLRICCTSRGIMGCLGNKGCISVSMSFYQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTPHSRMPDKILDHDRIIWFGDLNYRISLSHDDAKRLVEKKDWPALFNKDQVYWCTNHSDCKVNNKYKNFAVDGEEKFEGFGMLQQELGISRLRNQLLM 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01003 434 Gene3D Endonuclease/exonuclease/phosphatase 61 407 IPR036691 -
Pste1g01003 434 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 53 388 IPR045849 GO:0004445
Pste1g01003 434 MobiDBLite consensus disorder prediction 46 69 - -
Pste1g01003 434 Pfam Endonuclease/Exonuclease/phosphatase family 82 385 IPR005135 GO:0003824
Pste1g01003 434 SMART i5p_5 75 429 IPR000300 GO:0016791|GO:0046856
Pste1g01003 434 MobiDBLite consensus disorder prediction 1 22 - -
Pste1g01003 434 SUPERFAMILY DNase I-like 71 390 IPR036691 -
Pste1g01003 434 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01003 Pste-Chr1 3195584 3202112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01003 241 387 Acyl Lipid Metabolism Gene Families AT2G43900 24.561 7.36e-13 68.9