Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00912 AAGTAATCCTGACCGTGTATTTCATCTTCAATCTCTCTGAATCTGAATCCCAAAGTGGCAACTCCAACATTATTAAATACCAAAATTTCCAACCCTTCAAATCCTAAAGTGGTAACTCTAATTCCAGCCGTCTCTTAATTCTTTTCAAGCTTAACAGTCAAAATCAGAACACTACTCCTCCAACAAACTAGTGTGTGTTTTATTGGATCTCCAACTTCAGGGTTTCATGACTCTTCTGCAATAAAAGGGTGTGTGATGGATGAAGGTTTGTGCCAAAACCCTGTTCCCGGTTCTGGTTTTGTTGATAAAACTAGGATTGTAGAGGCTAAGCCCCTACGTAGTTTGGCACCTGTGTTGCCAAAATCTCTTCAATCTTCTCTCTCTGGACAGTACCCTTCTGTGTTTCCTCCATTTGTTTTGTGTGAGGAGCCTCAAGAGTCTCAGCCATCACCTGCTCCCATACCAGCTCCAATCAGGTCGTACAGGAATCCAGTGGATGAAGAAGAAACCCCTCATGGAGCCCATGGAGGTACTTGTTCACCTATGAAGGATCTCAATGGTAAAAGTGAGGATGCAGATAGCCAAAAGCGTGCTGTGCCACCTATGAACAGCTGCAATTTATCCCAAAAGAGGAGCAAGAAAACTAAGGAGTCACAGTTAGATTTGAGTTCTTCAGTTGGTATTAGTGTGGCCCTAAGGGATGACGGTGATCGCGAAGTGGTTAATCTTGTGCTCATGACTTTTGATTCTATTAGGAGAAGGCTTTGCCAACTTGAAGATTCCAACGAGTTGAACACAATGATGGCAATCAAGCGTGCAGATTTAAGAGCATCCACTGTGATGACGAGCAAAGCTTTTCGAACAAACATGAGGAGGAGAGTAGGAGCAGTGCCTGGGGTTGAGATTGGGGATATCTTCTTTTTCCGGTTGGAAATGTGTATTGTGGGTTTACATGGTCAGTCAATGAGTGGAATAGACTACATGGTTGTCAAAGATGAGGTTCAGGAGGAACAAGTGGCTTTAAGCATTGTTTCCTCAGGAGTATATGATAATAACACAGATGATGATGATGTTTTAGTTTATAGTGGTCAGGGTGAGAACTTCAACAAGAAAGATAAGCATGTGCTTGATCAGAAGCTTCATAGAGGTAATCTTGCTTTAGATAAAAGTTGGCGGCGACAAAATGAAGTGAGAGTCATCCGGGGCTTGAGAGATGCTGCAAACAAAAATGCAAAAATCTATGTCTATGATGGTCTGTATAAAATTCAAGATACTTGGATAGAAAAAGGGCAATCTGGTGGTGGTGTATTTAAGTATAAGTTTGTTAGATTGCCTGGACAACCAAGTGCTTTTGCTGGTTGGAGATCAGTTCAGAAGTGGAAGACTGACTCATCAACTTTAAGGACTGGGCTTATTCTTGCAGATCTCTCGACAGGATCTGAGAGTATACCTGTACCTCTTGTCAATGAAGTTGACAATGAGAAGGGGCCTTCGTTTTTCACTTATTTCCATTCTCTCAAAGATCCAAAACCATTCAGTTCAGTGCAATCTTCGTATGGATGCAACTGTAACAAAACATGTGTCCCTGGTGATTTGAGCTGCTCTTGCATTCAAAGAAATGAAGGTGACTTTCCATATACTGCAAATGCTATTCTAGTGAGTCGGAAACCATTAGTTCATGAGTGTGGCCCAATGTGCAAGTGTTTTCCTAACTGCAAGAATCGAGTATCCCAGACTGGTTTGAAGCACCAAATGGAAGTGTTCAAAACAAAAGATAGAGGGTGGGGACTTCGATCACTGGATGCTATACGTGCTGGTACTTTTATTTGCGAGTATGCAGGAGAAGTTATTGACAGATCCAAGGTAAATGAAAATTGGGGATATAATGATGAGTATGTTTTTGATACAAGCCGTATTTTTCATCCATTCAAATGGAACTTTGAACCTAGTTTATTGGAAGAAATAAGCACAAATATCTCTAGTGAAGATTATGCTATATCGTCTCCTCTAATTATCAGTTCCAATAATTTTGGAAATGTGGCTAGATACATGAATCACAGTTGCTCCCCAAATGTTTTCTGGCAGCCAGTCTTGTATGCAGAAAACAATCAATCCTTTCTTCATATTGCATTTTTTGCCCTTAGACACATTCCTCCAATGGCAGAGTTAACATATGATTATGGATGTTCTGGTCAAGCTGAGGGTAGCAGTGCACCCAAAGAGAGAAATAAATGCTTGTGTGGATCATCAAAATGCCGTGTTGCTAAGGGACAGGCATGGTGCTGGCAAATTTATTCATGGCTAAAA 2307 0.4105 MDEGLCQNPVPGSGFVDKTRIVEAKPLRSLAPVLPKSLQSSLSGQYPSVFPPFVLCEEPQESQPSPAPIPAPIRSYRNPVDEEETPHGAHGGTCSPMKDLNGKSEDADSQKRAVPPMNSCNLSQKRSKKTKESQLDLSSSVGISVALRDDGDREVVNLVLMTFDSIRRRLCQLEDSNELNTMMAIKRADLRASTVMTSKAFRTNMRRRVGAVPGVEIGDIFFFRLEMCIVGLHGQSMSGIDYMVVKDEVQEEQVALSIVSSGVYDNNTDDDDVLVYSGQGENFNKKDKHVLDQKLHRGNLALDKSWRRQNEVRVIRGLRDAANKNAKIYVYDGLYKIQDTWIEKGQSGGGVFKYKFVRLPGQPSAFAGWRSVQKWKTDSSTLRTGLILADLSTGSESIPVPLVNEVDNEKGPSFFTYFHSLKDPKPFSSVQSSYGCNCNKTCVPGDLSCSCIQRNEGDFPYTANAILVSRKPLVHECGPMCKCFPNCKNRVSQTGLKHQMEVFKTKDRGWGLRSLDAIRAGTFICEYAGEVIDRSKVNENWGYNDEYVFDTSRIFHPFKWNFEPSLLEEISTNISSEDYAISSPLIISSNNFGNVARYMNHSCSPNVFWQPVLYAENNQSFLHIAFFALRHIPPMAELTYDYGCSGQAEGSSAPKERNKCLCGSSKCRVAKGQAWCWQIYSWLK 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00912 684 SUPERFAMILY SET domain 397 668 IPR046341 -
Pste1g00912 684 Pfam Pre-SET motif 392 490 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste1g00912 684 Gene3D - 192 381 IPR036987 -
Pste1g00912 684 ProSiteProfiles Post-SET domain profile. 656 672 IPR003616 -
Pste1g00912 684 SMART preset_2 388 482 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste1g00912 684 ProSiteProfiles Pre-SET domain profile. 434 495 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste1g00912 684 SUPERFAMILY PUA domain-like 192 382 IPR015947 -
Pste1g00912 684 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 94 666 - -
Pste1g00912 684 Pfam SET domain 509 643 IPR001214 GO:0005515
Pste1g00912 684 SMART set_7 498 649 IPR001214 GO:0005515
Pste1g00912 684 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 192 377 - -
Pste1g00912 684 ProSiteProfiles YDG domain profile. 210 358 IPR003105 -
Pste1g00912 684 MobiDBLite consensus disorder prediction 58 133 - -
Pste1g00912 684 Gene3D SET domain 382 670 IPR046341 -
Pste1g00912 684 SMART G9a_1 205 362 IPR003105 -
Pste1g00912 684 ProSiteProfiles SET domain profile. 498 643 IPR001214 GO:0005515
Pste1g00912 684 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 22 682 IPR025794 GO:0016571
Pste1g00912 684 Pfam SAD/SRA domain 209 362 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00912 Pste-Chr1 2840913 2843535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00912 12 672 Su(var)3-9 homologs AT5G04940 49.280 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste1g00912 SAD_SRA 1.3e-46 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00912 1 2840913 2843535 Pste1g00912 1 2840913 2843535 ECH
Pste3g01053 3 6784731 6786728 Pste1g00912 1 2840913 2843535 PCT