Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00845 GAGCTATTCATTGGTCGTTGGAGTTGCTGTCTCCACGGCATTGAAACGGGCTGTGCTAAGATTAATCTCAGCTTCATGATCCTTCTTCTAACCACAACAAATGCACAAGCACCAATTTACAATACAAATTTTTGTGAGAAGTCAACTCATATTAGCCCTTCATACAAAACCAATGTTAAAACCCTCATCTGTTGGGCAACTAATAGCAATAACGGTTTCGGTGATGTTGTTTATAATTTGTACAGCTGCAAATACGACATCACAGGATATTTGTGTCAGTTCTGTCTTACCAGTGCTGCCAACGACATCTCTCGGCTGTGTCCTAATAGTGTAACAGCTATTATATGGTATGATGTATGCATCCTTCGTTACTCACACCAGAATTTCCATGGCAAAGTTAGTTTAAGCCCAATATGGAACATTACCGGACCCAGAAAAATCAAGATGCTATACCTTATTTCTCGCCAAGAAGGAACTAGTAATTCAAGAAAGTTGATAATTTCCTTAAGTGTCTTGCGGTTTGTAGTTTTACTATGTTTCAGTGTCTACTTCTTCTGGTGCAGGAAACGAGTTAGAGAAGATGAGATATCGCTCGATGAGGAAACATGGAATGGAGACTTGCCAACAATCCCATTAATCAGAATTCTACAAAGTACCAATAACTGTTCAGAAACTTCTAAATTAGGGGAAGGTGGATTTGGCCTTGTTTTCAAGTTTGGTATTTATTACATAAATTCTTTACTTTTGTCATCTTTTTATGTGGATTTGGCCTTGCTTTTACAGGGAATGCTACCAAATGGAAGACAAATTGCAGTAAAAAAACTCAAAATTCTCTGGTCAAGGTTCAGAAGAACTTTTGGGATATTGCTTGGAGAAAATGAGAAGATACTTGTATATGAGTATATGTCTAATGGAAGCCTCCACTCTCACTTGTTTGATTATGAGAAAAAAATGCAGCTTGATTGGAACTTAAGATTGAGAATTATTAATGGAATAGCAAAAGGTATTGTATACCTCTACGAGGATTCTAGACTCAGAGTAATTCATAGGGATCTCAAAGCTAGCAGTGTCTTATTAGATGATGAGATGAATCCTAAAATATCAAATTTTGGATTAGCAAAAGCATTTGAAATAGGAAAAACCAAGCAAATCGGACAAAACCAAGCAAATACAAAACGATTAAAATCAGATGTTTTTAGCTTTGGAGTTCTAGTTTTAGAAATCATTATTGTCAAAAAGAACAGTGATTCCATTTGTCAGACCATGGTCAAAAGTCTTCTTTTGTATGCTTGGAACGTATGGTATGCAGGAAAATGTTTGGAATTGATGGATCCAGTATTGGTGAAATCCTTCATAGCTAGTGAAGTTGAGAAGTGCTTACACATTGGTTTGTTGTGTGTTCAACAAGAAGCAGAAGATAGACCAACTATGTCCACTGTTGTTCTAATGCTGGGAAGTGAAACAATGACTCTTCCAAAACCTAACAGCCAGCATATTCAGTTGCCAAACAACATCAACTTCAAGAAGTTCCAATAA 1536 0.3665 ELFIGRWSCCLHGIETGCAKINLSFMILLLTTTNAQAPIYNTNFCEKSTHISPSYKTNVKTLICWATNSNNGFGDVVYNLYSCKYDITGYLCQFCLTSAANDISRLCPNSVTAIIWYDVCILRYSHQNFHGKVSLSPIWNITGPRKIKMLYLISRQEGTSNSRKLIISLSVLRFVVLLCFSVYFFWCRKRVREDEISLDEETWNGDLPTIPLIRILQSTNNCSETSKLGEGGFGLVFKFGIYYINSLLLSSFYVDLALLLQGMLPNGRQIAVKKLKILWSRFRRTFGILLGENEKILVYEYMSNGSLHSHLFDYEKKMQLDWNLRLRIINGIAKGIVYLYEDSRLRVIHRDLKASSVLLDDEMNPKISNFGLAKAFEIGKTKQIGQNQANTKRLKSDVFSFGVLVLEIIIVKKNSDSICQTMVKSLLLYAWNVWYAGKCLELMDPVLVKSFIASEVEKCLHIGLLCVQQEAEDRPTMSTVVLMLGSETMTLPKPNSQHIQLPNNINFKKFQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00845 511 Pfam Salt stress response/antifungal 52 126 IPR002902 -
Pste1g00845 511 SUPERFAMILY Protein kinase-like (PK-like) 207 487 IPR011009 -
Pste1g00845 511 FunFam Os07g0541700 protein 302 391 - -
Pste1g00845 511 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 496 - -
Pste1g00845 511 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Pste1g00845 511 Pfam Protein tyrosine and serine/threonine kinase 284 482 IPR001245 GO:0004672|GO:0006468
Pste1g00845 511 Gene3D - 30 129 IPR038408 -
Pste1g00845 511 Gene3D Transferase(Phosphotransferase) domain 1 302 500 - -
Pste1g00845 511 Gene3D Phosphorylase Kinase; domain 1 185 285 - -
Pste1g00845 511 ProSiteProfiles Protein kinase domain profile. 222 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00845 Pste-Chr1 2612659 2622537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00845 77 494 Receptor kinase-like Gene Family AT4G23190 33.902 1.57e-75 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00845 PK_Tyr_Ser-Thr 2.7e-19 CL0016