Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00607 CTTATTCCTCCCAGAGACCACCACTGCACGGTAGAATCGCTAATTGGAGTCAATGGTTTTGATGCGTCTATCATCCACCAAATTCAAAGCAACTTAAAATACTCCATGTTGGGAAAACTACTTAGCCTGAGATCAACATGCTTTGCTTTCTTATTATTGTTCAGTTTCAGACCATTGGTTATGAAGGCACAAACACGCATTTATGTGGGAAGTAACTGCCAAAATAACCCCCAACAATCTCTCAGCAGTGCATACGAAACCAATCTTAAGAGATTGCTCGAATGGGCAACCTCAGATTCAGCCACAAGCAAAGGTTACAACAGCACTAGAATAGGCAACAAAAGTCCTGTGTATGGCCACTATGATTGCCGTGGTGATGTGGGGGGATACTTTTGTCAATTTTGTGTTTCTAATGCTGCTAGAGAAGTACCTCGGCGCTGCCCCAATAGGGTGTCTGCAATGGTTTGGTATGATTACTGTATTCTAAAGTACTCAAATGAGAGTTTCTTTGGGAAAATTTTAACAAACCAATCATGGCTTTTTCTTGGAACCAAAAACATATCAAACAAAGCGGAGATTCGGAAAGATGAGGATTTTGTGAGATATTTGATCAGAAAGGCAACTAAAGAAACCAACCAGTTGTACTATATGGATTACTTCAATTTGAGTTTCACTCAGAGAAGGTATGGCATGGTGCAGTGTTGTAGAGATCTTACAAATGAAGGGTGCAGACAGTGTTTGGAGGCCATGTTAGCACAAGTTTCCAAATGCTGCGGGCAAAAAATAGGATGGTTTATTTGGTCAGGAACTTGTATGATAAGGTATGATGATGAAATGTTCTACCTTCTTAATAACCAAACCTCTTCACTTCCGGTGCCAAATATGCAAACAGCCAAACTTGGCGGTAATAAGAGGTCAAAAATCATGATTATTAGCTTCGGTGTGATGGGGTCAATAACTCTCCTATGTTTCAGTGTATATTGTTTCTGGTACTGGAGAAGAGTTAGAAAAGATTGGTTTCATCTATCTTCATTTCATAAAATTCAAACTGAGGAAACATGGACAACAGACTTGCCTAAAGTCCCTTTAGCCGCAATTCTACAGAGTACTGATAACTTTTCCGAAGCATTTAAATTAGGGGAAGGAGGATTTGACTCTGATTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTTAAAAGGCTCTCAGAATTTTCTAGTCAAGGCTCTGAGGAGTTCAATAATGAAGTGATATTTATAGCTAATTTGCAACATCGCAACCTTGTGATAATTTTGGCATGTTGCTTGGATGAAAATGAAAAGATACTTGTATACGAGTATTTGCCTAATAAAAGTCTCGACTTTCACTTGTTTGATGATGAGAAAAGAAAACAGTTAGATTGGAAACTGAGATTAAGGATTATAAATGGAATAGCAAGAGGTATTCTATACCTTCATGAGGACTCAAGGGTCACAGTTATTCATAGAGATCTCAAAGCTAGCAATGTTTTATTAAACCACGATATAAATCCCAAAATATCAGATTTTGGGTTGGCAAAAACATTTGAAATAGGACAAGCCAAGAAAAAACAAAACGACGGATACATGGCTCCAGAGTATGTTATGCAAGGATTATTTTCAGTGAAATCTGATGTTTTCAGTTTTGGAGTTCTTAAATCAGTTGTGGAAAAAAAGAATAGTGGATTATACATGTCAGAGCATGGTCAAACTCTTCTTTTATATGTGAGTCATCCCTGTGTTCTGGCTTGGAGAATATGGTGTGCAGGAAAATGTTTGGAATTGATGGATCCAATACTTGTAAAATCTTTCATAGGCAGTGAAGTTGAGAGGTGCATACACATTGGCTTGCTGTGTGTTCAAGAAGATGCAAAAGATAGACCAACCATGTCTGATGTTGTTGTAATGTTGGTAAGTGAGACAATGGCCCTTCCAAAGCCCAAGCACCCAGCATTTTCAATTTGGAAGAATGGCCTCAGAGGAAGTAACAACATCAGAAGGTTCAAAGAATCTTTCAAA 2040 0.3833 LIPPRDHHCTVESLIGVNGFDASIIHQIQSNLKYSMLGKLLSLRSTCFAFLLLFSFRPLVMKAQTRIYVGSNCQNNPQQSLSSAYETNLKRLLEWATSDSATSKGYNSTRIGNKSPVYGHYDCRGDVGGYFCQFCVSNAAREVPRRCPNRVSAMVWYDYCILKYSNESFFGKILTNQSWLFLGTKNISNKAEIRKDEDFVRYLIRKATKETNQLYYMDYFNLSFTQRRYGMVQCCRDLTNEGCRQCLEAMLAQVSKCCGQKIGWFIWSGTCMIRYDDEMFYLLNNQTSSLPVPNMQTAKLGGNKRSKIMIISFGVMGSITLLCFSVYCFWYWRRVRKDWFHLSSFHKIQTEETWTTDLPKVPLAAILQSTDNFSEAFKLGEGGFDSDYKGILPDGRQIAVKRLSEFSSQGSEEFNNEVIFIANLQHRNLVIILACCLDENEKILVYEYLPNKSLDFHLFDDEKRKQLDWKLRLRIINGIARGILYLHEDSRVTVIHRDLKASNVLLNHDINPKISDFGLAKTFEIGQAKKKQNDGYMAPEYVMQGLFSVKSDVFSFGVLKSVVEKKNSGLYMSEHGQTLLLYVSHPCVLAWRIWCAGKCLELMDPILVKSFIGSEVERCIHIGLLCVQEDAKDRPTMSDVVVMLVSETMALPKPKHPAFSIWKNGLRGSNNIRRFKESFK 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00607 680 ProSiteProfiles Gnk2-homologous domain profile. 175 280 IPR002902 -
Pste1g00607 680 Pfam Protein tyrosine and serine/threonine kinase 378 559 IPR001245 GO:0004672|GO:0006468
Pste1g00607 680 Pfam Salt stress response/antifungal 73 166 IPR002902 -
Pste1g00607 680 Pfam Salt stress response/antifungal 218 277 IPR002902 -
Pste1g00607 680 Gene3D Transferase(Phosphotransferase) domain 1 449 653 - -
Pste1g00607 680 FunFam Cysteine-rich receptor-like protein kinase 28 69 168 - -
Pste1g00607 680 ProSiteProfiles Gnk2-homologous domain profile. 67 169 IPR002902 -
Pste1g00607 680 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 64 664 - -
Pste1g00607 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Pste1g00607 680 Gene3D Phosphorylase Kinase; domain 1 335 448 - -
Pste1g00607 680 Gene3D - 66 169 IPR038408 -
Pste1g00607 680 Gene3D - 179 280 IPR038408 -
Pste1g00607 680 ProSiteProfiles Protein kinase domain profile. 373 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00607 680 FunFam Lectin-domain containing receptor kinase A4.3 449 661 - -
Pste1g00607 680 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 347 448 - -
Pste1g00607 680 SMART serkin_6 373 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00607 680 SUPERFAMILY Protein kinase-like (PK-like) 347 644 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00607 Pste-Chr1 1965991 1968997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00607 45 659 Receptor kinase-like Gene Family AT4G05200 39.720 3.48e-150 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00607 PK_Tyr_Ser-Thr 9.3e-36 CL0016