Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00380 ATGGGAGTGGTGGTAATCGACGGCAGCACCGTGCGCGACTTCGTGAACGACGAATCCGCCTTCACGAAAAGCGTCGACGAGCAGTTCCAGTCGCTGGACGTCAACAACGACGGCGTCCTGTCGCGCGCGGAGCTGCGCACGGCCTTCGAGTCCATGCGCCTCATCGAGGCGCACTTCGGCATCGACGTCGCCACGCCGCCGGAGCAGCTCACGCTCCTCTACGACTCCATCTTCGATAAGTTCGACGGCGACCACAGCGGCGCCGTCGACCGCGGCGAGTTCCTCCAAGAGATGAAAACCATCATGTTAGCCATCGCCGACGGCCTCGGCGAGTTCCCGATCCGCATGGTTCTCGAAGATGACCCCACTAGCTTGCTCCAGAAGGCCGCGGATCGAGAAGCTTCCAAGATCAATTGA 417 0.6163 MGVVVIDGSTVRDFVNDESAFTKSVDEQFQSLDVNNDGVLSRAELRTAFESMRLIEAHFGIDVATPPEQLTLLYDSIFDKFDGDHSGAVDRGEFLQEMKTIMLAIADGLGEFPIRMVLEDDPTSLLQKAADREASKIN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00380 138 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Pste1g00380 138 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 121 - -
Pste1g00380 138 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Pste1g00380 138 SMART efh_1 24 52 IPR002048 GO:0005509
Pste1g00380 138 SMART efh_1 73 101 IPR002048 GO:0005509
Pste1g00380 138 Gene3D - 8 106 - -
Pste1g00380 138 Pfam EF-hand domain pair 27 99 IPR002048 GO:0005509
Pste1g00380 138 ProSitePatterns EF-hand calcium-binding domain. 33 45 IPR018247 -
Pste1g00380 138 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Pste1g00380 138 SUPERFAMILY EF-hand 25 103 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00380 Pste-Chr1 1319487 1319903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00380 1 137 EF-hand Containing Proteins AT2G44310 69.343 1.30e-64 191