Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00339 ATGAATTATAGTCCCAAAGGGGCTTTCAAGATGAGCCGTACTCGTGTCAATTCATCAAATAACATAGAAAATCATGTTGGAAAGGTAAATCAAGATACAAGTGATGCCTCCATAATTGATGACACAACTAGTGGATCAAGACAAGTGCATCAAGTTTCCAAAAATGATGCAAAGGAGACAATACGTAAACAAACATCTAAACCTCATAAATTAGAAAATCCTATTAACACTTCTGATTTTTCCACTTCTCAACACCTAAGTCAAAGTACAAGAATGGATAAAAGTTCTAACCCTTCAGCTACCTCATCAAGAGTAATAGGCCAAGTTTTAAAAAATGATGCAAAGGAGACAAGACTATTAACAAAAAGTACAAGAGAGTTTCGTATACCTACAGAAACCACCCATCAAGGTCAACGAAATAGCTCTAGGTCTCGTAGTAATAGTTTGGAGAGCACTAATTGTACACATATTAAGCCACATACCGGAGGTGATGTGAGGTGGGATGCAATTAACATAGTTTCTAGAGGTAATGGTCTTACGCTTAGTCATTTTAGGCTTCTAAAGCGTGTTGGATATGGAGATATTGGAAGTGTATACCTGGTTGAACTTAAAGGAAGTAAGGCGTTTTTTGCCATGAAGGTAATGGATAAGGCATCACTTGCAAACAGAAACAAGCTTTTGAGAGCACAAACAGAAAGGGAGATTCTTGGACTTCTTGACCACCCATTTTTACCAAATTTATATTCTTATTTTGAGACTGATAAATACTATTGTTTGGTCATGGAGTTTTGTAGCAGTGAATTCAATGTCTTAATTAATGATTTCTTGCACAGGTTTTATTGTTCAGAGATTTTGTTAGCTTTGGAATACTTGCACATGTTAGGCATTGTCTACAGAGACTTGAAACCAGAAAATGTTCTAGTTCGAGATGAAGGGCACATAATGTTATCAGATTTTGACCTATCTCTTCGTTGCTCTGTCAACCCTACACTTGTGAAGTCATCATCTGCACATACAAGCAGCAATGGTCCATCTGGGGGACTTTTGGAGGATGAGCCAGTTGAACTAGGTTGCATACAGCCCTCAAGCTTTTTCCCACGGATTTTGCCTTCAAAAAAGAACAATAAGTCAAAGTCAGATTTTGGCCCCATTGTTGGAGGGTGTCTCCCTGAACTAATGGCAGAGCCTACAAATGTGAGGTCAATGTCCTTTGTAGGGACACATGAGTATCTTGCACCAGAGATTGTTCGTGGTGAAGGGCATGGAAGTGCAGTGGATTGGTGGACATTTGGGATCTTCTTGTATGAGCTTTTGCATGGGACAACACCCTTCAAAGGCGCAGGAAACAAAGCCACTCTTTTTAATGTTGTAGGTCAACCTTTAAGGTTCCCAGAAAAACCTCGTGTTAGTAATGTTGCAAGAGACCTTATAAAAGGGTTGTTGGTGAAAGAACCCCAAAAACGATTTGCTTATAAGAGAGGTGCCACAGAAATTAAACAACATCCTTTTTTTACTGGAGTGAATTGGGCTCTAATTAGAAGTACTACACCTCCTGTTATACCAGAACCTTTTGATTTTTCAAAGTATGCTAGTAAAGCAAATGCTCCTCCACCGGACAAGAAGATTGCTGATATTGTTGCAAGTGATAAAAGTAGGTGCATAAAACCTAGTTCTTCTTATGAGAATTTTGAGTATTTTTAG 1701 0.3857 MNYSPKGAFKMSRTRVNSSNNIENHVGKVNQDTSDASIIDDTTSGSRQVHQVSKNDAKETIRKQTSKPHKLENPINTSDFSTSQHLSQSTRMDKSSNPSATSSRVIGQVLKNDAKETRLLTKSTREFRIPTETTHQGQRNSSRSRSNSLESTNCTHIKPHTGGDVRWDAINIVSRGNGLTLSHFRLLKRVGYGDIGSVYLVELKGSKAFFAMKVMDKASLANRNKLLRAQTEREILGLLDHPFLPNLYSYFETDKYYCLVMEFCSSEFNVLINDFLHRFYCSEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHTSSNGPSGGLLEDEPVELGCIQPSSFFPRILPSKKNNKSKSDFGPIVGGCLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNKATLFNVVGQPLRFPEKPRVSNVARDLIKGLLVKEPQKRFAYKRGATEIKQHPFFTGVNWALIRSTTPPVIPEPFDFSKYASKANAPPPDKKIADIVASDKSRCIKPSSSYENFEYF 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00339 566 FunFam Serine/threonine-protein kinase D6PK-like 182 267 - -
Pste1g00339 566 FunFam Serine/threonine-protein kinase AGC1-7 397 522 - -
Pste1g00339 566 MobiDBLite consensus disorder prediction 52 69 - -
Pste1g00339 566 MobiDBLite consensus disorder prediction 70 108 - -
Pste1g00339 566 SUPERFAMILY Protein kinase-like (PK-like) 181 533 IPR011009 -
Pste1g00339 566 PANTHER FLIPPASE KINASE 1-RELATED 36 530 - -
Pste1g00339 566 SMART serkin_6 184 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00339 566 MobiDBLite consensus disorder prediction 1 51 - -
Pste1g00339 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Pste1g00339 566 Pfam Protein kinase domain 185 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00339 566 Pfam Protein kinase domain 401 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00339 566 Gene3D Transferase(Phosphotransferase) domain 1 277 345 - -
Pste1g00339 566 MobiDBLite consensus disorder prediction 1 157 - -
Pste1g00339 566 MobiDBLite consensus disorder prediction 130 157 - -
Pste1g00339 566 Gene3D Transferase(Phosphotransferase) domain 1 400 522 - -
Pste1g00339 566 MobiDBLite consensus disorder prediction 115 129 - -
Pste1g00339 566 CDD STKc_phototropin_like 182 523 - -
Pste1g00339 566 FunFam Serine/threonine-protein kinase OXI1 265 327 - -
Pste1g00339 566 ProSiteProfiles Protein kinase domain profile. 184 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00339 566 Gene3D Phosphorylase Kinase; domain 1 173 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00339 Pste-Chr1 1210702 1215636 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste1g00339 Pkinase 5.5e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00339 1 1210702 1215636 Pste1g00339 1 1210702 1215636 ECH
Pste3g01653 3 10415388 10419095 Pste1g00339 1 1210702 1215636 PCT