Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00248 ATGGAGTCGCCGTTCAAAGCAGAAATTCTGAAGGGGAAGGTTGCTCTGATCACAGGCGGCGCCTCCGGAATCGGCTTCGAAATCTCCACACAACTCGGAAAGCATGGCGCCTCCGTCGCCCTCATGGGTCGCCGCAAGCAAGCGGTGGGGTTTGAGGGCGATGTGAGGAAGCAAGAGGATGCGGCGAGAGTGGTGGAGTCCACGTTTAGGCATTTCGGGAGGATTGATATACTTGTAAATGCTGCAGCTGGGAACTTTCTTGTTTCTGCTGAGGATTTGTCTCCCAATGGCTTTCGAACAGTTTTGGACATTGACTCTGTTGGCACATTCACAATGTGCCATGAAGCACTAAAATATCTCAAGAAAGGGGGAGAAGGAAGGAGCAACACTTCTAGTGGGGGAGCAATAATAAACATTAGCGCTACCTTGCATTATACAGCTTCTTGGTACCAAATTCACGTGTCTGCAGCAAAGGCAGCTGTTGATGCCACTACAAGAAACTTGGCACTTGAATGGGGAACAGACCATGATATTAGAGTCAATGGGATTGCACCAGGTCCAATAAGTGACACTCCTGGCATGAGTAAACTGGCTCCTGAAGAAATAAGTAACAAAGCCAGAGATTACATGCCACTGTATAAACAAGGGGAGAAATGGGATATTGCTATGGCTGCACTTTTTCTAGCATCAGATGCAGGGGAGGAGGTAGCTTATTTTTTATGGGGAAAATACATCAATGGTGATACTTTGATAGTTGACGGAGGACTTTGGCTGAGTCGGCCTCGTCATTTACCAAAAGAGGCTGTGAAGCAGGTATCTAGATCAGTAGAAAAGAGATCCAGAAATGCAACAGTCGGAGTTCCAAAAAGCAAGCTTTGAGCCAGCAGATTTCTGGTCTTAGGCCCTATACATAGCCGGGAATCAATTTTTTTATAATTTGTACAATATTATGGATTATTGGTATGAAAGATATGAATTGATACTTTTAAATTAGTAAGTAGTTGAACTTTCTCAAACTACAAACTATGATGGTGAAGAAGTCAGGCCTACATCCAAGACAACATCCCAAATAAAATAAAGTTTCAATGTTACTGTGGTTTATGCCTTATGCTGTCATTTGTGCTTGGAACTTTTAATCAAATCTAGCAGCAACTATGAACATGATATAAGGCTTGGAGAATAAACTGATCCATCTCAATCAAAGATTCGTCCATGGGATGCTCCCTGCTTAATGGGTTTGTAATTATAAAAGAACATCACCACAGTTCTAACCTGTATTCAGTCTTCAGTTTTGGATGAGGGGTGAAGAAAGTTTTTATTGTGATTTATCTTAAATCCATTGCTGCGGAAAATTTTTTTATTGAACGCCAATCTGGTGTGTTTGATGCTCCTAAACCAGAGGGCACTGACTGGCTTCACAGACCAGCAATCACCTCCGGGTCCTGACAGTGGAGGGAGAATACAGGCCGCTGCACTATCAGGTGTTCCAAGCTCATGAATCATCACTTTAAGTGAAGGAGAGTTTTACCAGCAAAATTTTTGACTAATTTGAAACTACTCTTTATTCAAATAAGAGACAAACAAATAATTC 1591 0.4249 MESPFKAEILKGKVALITGGASGIGFEISTQLGKHGASVALMGRRKQAVGFEGDVRKQEDAARVVESTFRHFGRIDILVNAAAGNFLVSAEDLSPNGFRTVLDIDSVGTFTMCHEALKYLKKGGEGRSNTSSGGAIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDHDIRVNGIAPGPISDTPGMSKLAPEEISNKARDYMPLYKQGEKWDIAMAALFLASDAGEEVAYFLWGKYINGDTLIVDGGLWLSRPRHLPKEAVKQVSRSVEKRSRNATVGVPKSKL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00248 292 CDD TER_DECR_SDR_a 10 258 - -
Pste1g00248 292 Pfam Enoyl-(Acyl carrier protein) reductase 19 256 - -
Pste1g00248 292 PRINTS Glucose/ribitol dehydrogenase family signature 128 144 IPR002347 -
Pste1g00248 292 PRINTS Glucose/ribitol dehydrogenase family signature 73 84 IPR002347 -
Pste1g00248 292 PRINTS Glucose/ribitol dehydrogenase family signature 176 193 IPR002347 -
Pste1g00248 292 PRINTS Glucose/ribitol dehydrogenase family signature 211 231 IPR002347 -
Pste1g00248 292 PRINTS Glucose/ribitol dehydrogenase family signature 14 31 IPR002347 -
Pste1g00248 292 PRINTS Glucose/ribitol dehydrogenase family signature 154 173 IPR002347 -
Pste1g00248 292 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 2 280 IPR045017 GO:0008670|GO:0009062
Pste1g00248 292 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 IPR002347 -
Pste1g00248 292 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 IPR002347 -
Pste1g00248 292 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 IPR002347 -
Pste1g00248 292 MobiDBLite consensus disorder prediction 271 292 - -
Pste1g00248 292 Gene3D - 1 262 - -
Pste1g00248 292 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 258 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00248 Pste-Chr1 876270 881549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00248 1 292 Acyl Lipid Metabolism Gene Families AT3G12800 73.941 1.69e-154 431