Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00182 CCTAAAGATAAAAAAGAACACTTCATTTCTCTCTCTTTTTCTGTTCTCTTTCTCCAATTTTTTCATCTCTTCTTCTTTTTTTATATCACTCTCGCTAGGGTTTCTCGATTCTGAATCCTTTTCGGCTCCTTCGACAATTCGTCCTCCCTCACGCACGGAATCCAGTTTCCGGACGCGTGATCTGAGCCAATTAGGGTTTCCAAATGAGTCCTCCAGCTGAATCCAACAACATGGAGGATGGAAAGTCCGAAAATGGTGGGGACCAAGTTGAATCTCGCTTTGAAGAATTCTGCAAGAATGGGCTAGCATTGGAAGAGGAAAGCTGTAAAGAAGCAATGAATCTGTTTGGAGAAACCAAGCATATTCTACTGACAAATTTTTCATCAATAGGGAATGGATCGTCACAAGAATCCGAGCGATATTGGTATGCTTTTATTCTGTACTCTGTCAAGAAACTGATCCAGAAAAATGAGGATGGAAAGGAAGAGAGTGAGAACACTGGACTTAGCCTGTGTCGTATATTAAGAGCAGCTAAGCTTAACATTGCAGATTTTTTCAAAGAACTTCCGCAGTTTGTTGTTAAGGCTGGTCCTACTCTAAGTAATCTATATGGCACAGATTGGGAAAACAGGCTTGAGGCAAAGGAGATTCATGCTAATGCTATTCACTTGAAGATTCTTAGCAAGTACTATAAACGTGTATTTGGAGAGTTATTCGTGGCAGCTGACACAAATGCTGAAAAGGGCTCATCCGTTACTATTCATGCATCTGAGTATCATCGATTTGGATGGTTGCTTTTCTTGGCACTTCGTGTACATGCTTTCAGCCGTTTCAAAGACTTAGTGACTTGCACCAATGGTTTAATTTCAATCTTGGCCATCTTAATTATTCATGTTCCAACACGGTTTCAGAATTTCAACATCCATGACTCCTCACGCTTTGTTAAAAAAAGTAACAAAGGCGTGGACCTCCTTGCATCACTTTGCAATATATATAATACTTCTGAAGATGAGTTGAGGAAAACCATGGAGAAAGCCAATAATTTGATAGCAGATATATTGAAGAAGAAGCCTTGCTTGGCGTCTGAATGCGAAATTGAAAACCTAGAGAATATAGATAAAGATGGTTTGACCTATTTTAAAGATCTGATGGAAGAATCATGTCTACCTTCTAATTTAATTATGTTAGAAAAAGATTATGATTACATGATTCGCAACAAGAGTGAATTGGATGAGAGGTTATTCATTAATGAGGATGACAGCCTATTAGCTTCAGGAAGCTTATCTGGAGGTTCTGTTTCAGCGGGTGGTGTAAAGCGAAAATTTGATTCAATAGCATCGCCAACTAAGACCATTACAAGTCCACTCTCACCTCATCGCTCCCCTGCATCACATCCTAACGGCATCCCAGGTAGTGCAAACTCAAAGATGGCAGCCACCCCTGTGAGCACAGCAATGACTACAGCAAAGTGGCTTCGAACTGTCATTTCTCCACTTCCTTCAAAGCCCTCAACAGAGCTGGAACGATTTTTGACATCATGTGATAGGGATGTTACAAGTGATGTGGTGCGCAGAGCACAGATCATATTGCAGGCTATATTTCCTAGCAGTCCTCTTGGAGAACGATGTGTAACTGGAAGCCTTCAAAGTGCAAACCTCATGGACAATATATGGGCAGAACAACGAAGATTGGAAGCACTTAAGTTATACTACCGGGTTTTGGAAGCAATGTGCAGAGCAGAAGCCCAAGTACTCCATGCTACTAATTTAACCTCTCTACTTACCAATGAGAGGTTCCATCGGTGTATGCTTGCATGTTCTGCAGAATTAGTCCTGGCAACTCACAAGACTGTAACAATGCTGTTCCCTGCAGTGCTGGAGAGGACAGGGATTACAGCCTTTGATCTTAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCTCTCCCAAGAGAATTGAGGCGACATCTGAATTCACTGGAAGAAAGACTTTTGGAAAGCATGGTATGGGAAAAGGGATCTTCAATGTATAATTCCCTGGCAGTTGCCAAATCCACCCTTTCTGCAGAGATAAATCGTCTTGGACTGTTAGCTGAACCTATGCCATCACTAGATGAAATTGCTATGCAGATTAATTTCTCTTGTGGAGGGCTGCCACCTGTGCCTATCTTGCCTAAGCTTGAAAGTTCACCAACTCAAAATGGGGATATCCTATCACCAAAGCGAAATGTGTTGATGGAAAGAAATTCTTTCACTTCCCCAGTGAAAGATCGGCTTCTCCCCTTCAGCAACCTTAAGTCAAAACTACCCCCACCTCCTTTGCAGTCAGCATTTGCCAGCCCAACAAAGCCAAATCCAGGAGGTGGAGGGGAAACATGTGCAGAAACTGGGATCAACATCTTCTTTAGCAAGGAACAACTTGATATAGATGTTGGATTTGATATTGAGAAATTTGAGATATTTCATGAAATGGAAATCATTAAGTTGGGAGCAGTCAGAATAAGTGGCATGGTTGAAAGGCTACAATTATCTCAGCAGATAAGGGAGAATGTATACTGTCTTTTCCAGCGGATCCTGAACCAATGGACATCTCTCTTTTTCAACCGTCATATTGATCAAATCATCTTGTGTTGTTTCTATGGAGTTGCAAAGATTTCACAACTCAACCTAACTTTTAGGGAGATCGTATACAACTACAGAAAGCAACCACATTGCAAACCACAAGCTTTTCGTAGTGTATTTGTTGATTGGTCATTGTCACGTCGAAATGGGAGAACAGGACAGGAGCACGTTGACATCATTACCTTTTACAATGAAATATTCATTCCATCTGTAAAGCCACTGCTGGTTGAACTTGGCCCTGCTGGAGCAACCACGAAAAGTGAACGAATACCTGAAGTTAATAATAAAAATGATGGCCATTTAGCTCAATGCCCAGGTTCTCCTAAAATATCACCTTTCCCAACCCTTCCTGATATGTCGCCAAAAAAAGTGTCTGCTACACACAATGTATATGTCTCTCCTTTACGATCGTCCAAGATGGATGCTCTAATATCTCATAGCTCAAAAAGCTACTATGCATGTGTTGGAGAGAGCACTCATGCATATCAAAGCCCTTCAAAAGATTTGACTGCCATCAATAACCGTTTGAATGGCAACCGGAAGGTGAGAGGTCCCCTCAATTTTGATGATGTTGATGTGGGGTTGGTTAGTGACTCTATGGTTGCAAACAGCCTCTATCTGCAGAATGGAAGTTGTGCATCATCATCAGGTGCACCATTGAAATCAGAGCAACCTGACTCTTAAAAAATAAATGTTGTGTATATTCTGCTTGTCTCATCTCTTGAGTCCATATACTAGTTGTTTTTTGAGAAGGGGGTATTGTATGAGCGGTGAGATTGTAGTATGCCGCCACTGCCCCCTTGTACTTGTGTATGTTAGGTATTTAATGCAAAAGGTAGGTTTCTGATTATAGCTAATATCAATAATAGTTTCCTTTCTAGGTCAACTTGGTTTTAATTTTCATTGGTTAAAAAATGTTCCACAGTTTTTCTTCGTTA 3562 0.409 MSPPAESNNMEDGKSENGGDQVESRFEEFCKNGLALEEESCKEAMNLFGETKHILLTNFSSIGNGSSQESERYWYAFILYSVKKLIQKNEDGKEESENTGLSLCRILRAAKLNIADFFKELPQFVVKAGPTLSNLYGTDWENRLEAKEIHANAIHLKILSKYYKRVFGELFVAADTNAEKGSSVTIHASEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPTRFQNFNIHDSSRFVKKSNKGVDLLASLCNIYNTSEDELRKTMEKANNLIADILKKKPCLASECEIENLENIDKDGLTYFKDLMEESCLPSNLIMLEKDYDYMIRNKSELDERLFINEDDSLLASGSLSGGSVSAGGVKRKFDSIASPTKTITSPLSPHRSPASHPNGIPGSANSKMAATPVSTAMTTAKWLRTVISPLPSKPSTELERFLTSCDRDVTSDVVRRAQIILQAIFPSSPLGERCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKSTLSAEINRLGLLAEPMPSLDEIAMQINFSCGGLPPVPILPKLESSPTQNGDILSPKRNVLMERNSFTSPVKDRLLPFSNLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFSKEQLDIDVGFDIEKFEIFHEMEIIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIVYNYRKQPHCKPQAFRSVFVDWSLSRRNGRTGQEHVDIITFYNEIFIPSVKPLLVELGPAGATTKSERIPEVNNKNDGHLAQCPGSPKISPFPTLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPLKSEQPDS 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00182 1034 MobiDBLite consensus disorder prediction 1 15 - -
Pste1g00182 1034 Pfam Domain of unknown function (DUF3452) 95 230 IPR024599 -
Pste1g00182 1034 FunFam Retinoblastoma-related protein 1 191 349 - -
Pste1g00182 1034 SUPERFAMILY Cyclin-like 759 921 IPR036915 -
Pste1g00182 1034 Coils Coil 264 288 - -
Pste1g00182 1034 MobiDBLite consensus disorder prediction 1 22 - -
Pste1g00182 1034 SMART DUF3452_2 85 230 IPR024599 -
Pste1g00182 1034 Gene3D - 415 603 - -
Pste1g00182 1034 FunFam Retinoblastoma-related protein 1 415 603 - -
Pste1g00182 1034 MobiDBLite consensus disorder prediction 381 409 - -
Pste1g00182 1034 FunFam Retinoblastoma-related protein 1 749 915 - -
Pste1g00182 1034 Pfam Retinoblastoma-associated protein B domain 758 879 IPR002719 GO:0005634|GO:0051726
Pste1g00182 1034 SMART RB_A_2 412 613 IPR002720 GO:0005634|GO:0051726
Pste1g00182 1034 Gene3D - 749 903 - -
Pste1g00182 1034 Gene3D - 191 349 - -
Pste1g00182 1034 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 20 1032 IPR028309 GO:0006357|GO:0051726
Pste1g00182 1034 Pfam Retinoblastoma-associated protein A domain 412 613 IPR002720 GO:0005634|GO:0051726
Pste1g00182 1034 SUPERFAMILY Cyclin-like 420 615 IPR036915 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Pste1g00182 RB_A 9.9e-65 CL0065