Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g6027 ATGGAAATTATTGCAAACTCTAAGAACAATAATGGTTCATCTTGTGCTTTAACAACTTGCAAGTACATTATTTGGGTACCTGCAAATGGTTTAGGTAACCAAATAATTAGCATGGCTTCATCATTTCTCTACGCGCTCCTAACAAACCGGGTTATGCTAGTAAAATTTGAACAAGATAAAGAGGGTTTATTTTGCGAACCGTTTCTGAATTCAACCTGGTTGTTATCGAAGAATTCGCCTTTCTGGAATGCAGAAAATGTTGAATCATATCAAAGATTTATAGACATGGAACTCTCCAATACACTCAATGAAGATTTGCCATTAGCTATGCATGTGGACTTGAGATATAGTCCATCAAATGATGAGAGATTTTTTCACTGTGATCACAGTCAATTTCTCCTCACAAAAATTCCTCTACTGTTTTTGGAAGCAGGTCAGTATTTTGTACCTTCTTTTTTCATGACACCAGTTTTTCAAAAAGAGTTAAACCAAATGTTTCCAGAAATCACTTCGATTTTCCATCATTTGGTACGCTACTTATTTCACCCTTCAAACAAAGCGTGGAAACTAATCACTAGTTTCTATCAACAACACCTTGCTAAAGCGAATCAAATCATTGGACTTCAAATAAGAGTACTGAATACCGAATCAACCCCACACGAACTTGTCATGGATCGAATTCTAAACTGCACATTACAGAATAAATTACTTCCAAAACTGCTCGATAATACAAAGAATACTTCATTGTCTTCTAATGGAAAAAACCCGATTATAAAAGCTATTCTCGTGGCGTCGTTATATCCACAATATAGTGAGAGTTTGAATGAGATGTATATGAATAAATCAACGGTTACCGGAGAGGTAATCGAGGTTCATCAACCAAGTAGTGAAGAGGAACAGATATTTGATGATTATAAGCATAATTTGAAGGCATGGGTTGACATGTATTTACTAAGTTTATCTGATGAATTGGTGACTACATATCAATCTACTTTTGGCTATGTTGCCAAGGGATTGGGAAATTCAAAACCATGGATTCTTTATAATCCTGCTAATAGTAATGAGGTTTGTGAACGTGAGTTTACATTGGAGCCATGTTATCATTATCCTCCTTTACGTTATTGTGATAGTGAAGACGTTATTGAAGATGTTTCATCTACTTTTCCTAATATTAGACATTGTAAGGATTATTCTTTTGGGTTGAAGCTAGTCAATAGTTCTCTTTAG 1227 0.3496 MEIIANSKNNNGSSCALTTCKYIIWVPANGLGNQIISMASSFLYALLTNRVMLVKFEQDKEGLFCEPFLNSTWLLSKNSPFWNAENVESYQRFIDMELSNTLNEDLPLAMHVDLRYSPSNDERFFHCDHSQFLLTKIPLLFLEAGQYFVPSFFMTPVFQKELNQMFPEITSIFHHLVRYLFHPSNKAWKLITSFYQQHLAKANQIIGLQIRVLNTESTPHELVMDRILNCTLQNKLLPKLLDNTKNTSLSSNGKNPIIKAILVASLYPQYSESLNEMYMNKSTVTGEVIEVHQPSSEEEQIFDDYKHNLKAWVDMYLLSLSDELVTTYQSTFGYVAKGLGNSKPWILYNPANSNEVCEREFTLEPCYHYPPLRYCDSEDVIEDVSSTFPNIRHCKDYSFGLKLVNSSL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g6027 408 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 407 IPR004938 GO:0008107|GO:0016020|GO:0042546
Psa7g6027 408 Gene3D - 189 360 - -
Psa7g6027 408 Gene3D - 17 72 - -
Psa7g6027 408 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 407 - -
Psa7g6027 408 Pfam Xyloglucan fucosyltransferase 11 375 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g6027 Psa-Chr7 489716169 489718258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g6027 20 404 Xyloglucan Fucosyltransferase1 AT2G03220 44.133 1.31e-113 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g6027 K13681 - gmx:100809919 500.745