Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5087 ATGGATTCTTCTAGTGAACAACAACATCAGCAAATGTCTAACCAGTCATTGGAGAGCATGTTAACATGCTCAAAAGGAGAACAAGACAAAAAGGCAAAACCTCAACCAGAAGCTCTAAAATGTCCAAGATGTGACTCAAGCAACACCAAGTTTTGTTACTACAACAATTACAGTCTTTCGCAACCAAGATATTTCTGCAAGTCGTGTAGGAGATATTGGACGAAAGGAGGTACATTAAGAAATGTTCCTGTTGGTGGGGGGTGTAGAAAGAACAAAAGATCGTCGTCGTCGGTGTCAAGAAGAATTCAAGATCAAGCATTTGTAAACAATCCGAATCCGGTCACTTGTTTCCCTTCGTTGTCTTATGATTCAAATGACCTCACTCTTGCTTTAGCTAGGCTTCAAAAGGGTCAACTTGGGTTCGATCATGAACATGATTTTTCCATTTTAGGAAACCACGCCAACTCAAACATAAACATAAACACAAACACCTCGTGTGCTGTTCTAAACAATCATGGTATGAACCATTCTTCCAACAATCATGGTTTCTTTGAAGCACTTATGGGATCTCAGAACAATGTGCAGAATCTGTACTATGGATATGGGAATAGGGACATGGGGGAAGTGGATAATGGCAATGTTAGTGGTGAGATGATGTTGCCTTATGACCATGAAATGAGCATTGCAACAACTCAAGCAGTGACAGTAACTACCATGAAACAAGAAATGTGTAATGTTAGGGAACAGAATGAAAATAGGGTTTTGTTAGGTTTTCCATGGCAGTTCAATAGTGGAGATTCAAACATGGATGAAATTGATCACTCAGGAAGAGCTGGGTGGAATGGTCTCACTTCACCTTGGCATGGCCTTCTCAATAGCCCCCTAATGTAG 891 0.4052 MDSSSEQQHQQMSNQSLESMLTCSKGEQDKKAKPQPEALKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSVSRRIQDQAFVNNPNPVTCFPSLSYDSNDLTLALARLQKGQLGFDHEHDFSILGNHANSNININTNTSCAVLNNHGMNHSSNNHGFFEALMGSQNNVQNLYYGYGNRDMGEVDNGNVSGEMMLPYDHEMSIATTQAVTVTTMKQEMCNVREQNENRVLLGFPWQFNSGDSNMDEIDHSGRAGWNGLTSPWHGLLNSPLM* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5087 296 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Psa7g5087 296 Pfam Dof domain, zinc finger 38 93 IPR003851 GO:0003677|GO:0006355
Psa7g5087 296 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Psa7g5087 296 MobiDBLite consensus disorder prediction 1 38 - -
Psa7g5087 296 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 8 295 - -
Psa7g5087 296 MobiDBLite consensus disorder prediction 24 38 - -
Psa7g5087 296 MobiDBLite consensus disorder prediction 1 23 - -
Psa7g5087 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 295 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5087 Psa-Chr7 446506757 446508601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5087 9 296 C2C2-Dof Transcription Factor Family AT2G28510 40.798 1.42e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Psa7g5087 zf-Dof 9.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5087 - - gmx:100799737 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5087 7 446506757 446508601 Psa7g5087 7 446506757 446508601 ECH
Psa5g6362 5 540259295 540260893 Psa7g5087 7 446506757 446508601 PCT