Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4085 ATGGGTTTGTGTTCAATTATTGTTGTTGTTGTTTTGATTCTTTGTTTGTGCGGAGAAGGTTTAGGTGTGAGAGAACAAGAAGAGGATAGAGTTTATGAACTACCAGGGCAACCTTTGGTGAATTTCAAACAATATTCAGGTTATATAACAGTGAATGAGAGTCATGGAAGAGCACTGTTTTATTGGTTCTTTGAATCTGTTGATCAACCTCAACAAAAACCTCTTCTCCTTTGGCTTAATGGAGGCCCTGGTTGTTCTTCAATTGGTTATGGAGAAGCTGAGGAGCTTGGACCCTTTTCTCCTCAAAATAGCACCCAACCTAAGCTCAAGTTGAACCCTTATTCTTGGAATAAAGCTGCAAATCTTTTATTTATTGAATCTCCTGTTGGAGTTGGATTTTCCTACACCAACACCACCACTGATATTAGTCAACTTGGTGACACCATTACTGCTAAGGATTCACACACTTTCCTCATCAATTGGTTTAAAAGATTTCCTCAATTCAAATCACATGATTTCTACATTGCTGGTGAAAGCTATGCAGGACATTATGTTCCACAACTTTCTGAACTCATTTTGGATAATAATAATAATAATCAGAACTCTTCCGATGAAGATCACATTAACTTCAAAGGGATCATGATTGGGAATGCATTATTGGATGATGAAACTGATCAAAAGGGTATGATAGAATATGCATGGGATCATGCTGTTATATCAGATGGTTTATACAAAAACATCACAACCATATGCAATTTTACCTATCCGATTCAAAATCAAACCGACGAATGCAATACCGAACTTAACAAATATTTCGATGTCTATAAGATCATCGACATGTATAGTTTGTACGCGCCGAGATGTTTCAGCAATGCCAGCAACACGAGAAGATCGTCGGACGGGTGGAATAAAATGCGAGCCGGATATGATCCATGTGCATCCGATTATACTGAACTTTATTTCAATAGGCCAGAAGTTCAAAAGGCACTGCATGCAAATGTCACCAAAATTTCATATCCATGGACTCACTGCAGTAACAATATATCGTTTTGGAACGAGTCGCCGGTGTCCATGCTTCCTGTCCTGAAGAAGCTTATTGCTGGCGGTCTTCGCATATGGATTTACAGCGGAGACACGGATGGAAGAATTCCTGTAACTGCGACGAGATACACATTGAAAAAATTGGGACTTCCTATAGTTCAAGATTGGACTCCTTGGTATACTAGTAGACAGGTAGGAGGATGGAGCATTGTATATGATGGGATAACATTTGTGACCATAAGAGGAGCTGGTCACCAGGTTCCTACTTTTGCTCCCAAGCAAGCTCTTCAGCTTGTTCGACACTTCTTAGTCAATAAGAATTTACCACAACATCCTATTTAA 1383 0.3926 MGLCSIIVVVVLILCLCGEGLGVREQEEDRVYELPGQPLVNFKQYSGYITVNESHGRALFYWFFESVDQPQQKPLLLWLNGGPGCSSIGYGEAEELGPFSPQNSTQPKLKLNPYSWNKAANLLFIESPVGVGFSYTNTTTDISQLGDTITAKDSHTFLINWFKRFPQFKSHDFYIAGESYAGHYVPQLSELILDNNNNNQNSSDEDHINFKGIMIGNALLDDETDQKGMIEYAWDHAVISDGLYKNITTICNFTYPIQNQTDECNTELNKYFDVYKIIDMYSLYAPRCFSNASNTRRSSDGWNKMRAGYDPCASDYTELYFNRPEVQKALHANVTKISYPWTHCSNNISFWNESPVSMLPVLKKLIAGGLRIWIYSGDTDGRIPVTATRYTLKKLGLPIVQDWTPWYTSRQVGGWSIVYDGITFVTIRGAGHQVPTFAPKQALQLVRHFLVNKNLPQHPI* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4085 460 Gene3D - 312 348 - -
Psa7g4085 460 Gene3D - 358 451 - -
Psa7g4085 460 SUPERFAMILY alpha/beta-Hydrolases 26 455 IPR029058 -
Psa7g4085 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Psa7g4085 460 Pfam Serine carboxypeptidase 36 451 IPR001563 GO:0004185|GO:0006508
Psa7g4085 460 Gene3D alpha/beta hydrolase 25 290 IPR029058 -
Psa7g4085 460 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Psa7g4085 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 24 459 IPR001563 GO:0004185|GO:0006508
Psa7g4085 460 PANTHER CARBOXYPEPTIDASE 24 459 - -
Psa7g4085 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Psa7g4085 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Psa7g4085 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Psa7g4085 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4085 Psa-Chr7 335035600 335040585 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4085 7 335035600 335040585 Psa7g4085 7 335035600 335040585 ECH