Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4068 ATGACTCTAATCACACCAAAGATCCTTCAGGGATCAGATCTCGACACACCAGTTGTACTTGTTGGCTTAGGTGGAAGTGTAGCTTCTGGCTTCAACTATGGTGATGCTCTTGACAAGAGTTTGATGTTCTTTGAAGCACAAAGGTCGGGTAAATTACCAATGCAAGAGCAGCGAATCAAATGGCGCGCTGATTCTGGTCTCAAGGACGGAATTCAGCAAGGAGTAGAGTTGGTGGGAGGGTACTATGATGCAGGTGATCATGTTAAGTTTGGGTTGCCAATGGCTTACAGTGTGACAATGCTTGCATGGGGAGCTATTGAGTTTAGCAAGGAAATGACAGACTTAAACCAAATCGGACATACGCTACGGGCCATTAAATGGGGAACTGATTATTTCGTCAAAGCGCATACTCAGCCTAATGTTCTTTGGGGACAGGTGGGTGATGGAGTTTCTGATCACTACTGCTGGGAACGTGCTGAAGACATGACGACTTCGAGAACTGCTTACAAAATTGATGAACAGCATCCTGGTTCTGATCTTGCAGGTGAAACTGCAGCTGCATTGGCGGCTGCAGCCATAGCTTTCAGGACATACAACTCTTCTTACTCTAATCTCTTGTTAGTCCATGCAAAACAGCTCTTCACGTTCGCAGATAGATACCAAGGCCTATATGATGAGTCCATATCCTGTGCTCACCAATTCTATGCTTCTTCTGGCTATTCAGATGAATTGTTATGGGCTGCTGCATGGCTGCACCAAGCAACCGGCGATGAATACTACCTAAAGTATGTCGTGGACAATGCGGTGTATATGGGTGGAACTGGATTGGCGGTGAAAGAATTCTCTTGGGACAACAAATATGCCGGTGTCCAGACCCTCCTATCAAAGGTATTACTAGAAGGAAAAGCTGGTCCATATGCATCTACACTAAAGCAATATCAGGCCAAAGCAGATTATTTTTCCTGCGCCTGTTTGCAAAAGAATGACGGTTACAATGTCCAGAAAACTCCCGGTGGCTTATTGTACTTGCATGATTGGAACAACATGCAGTATGCTTCCTCTGCCGCGTTTCTTTTAGCTGTTTACTCTAATTATCTGTCAGCTGCAAAAGCACAGCTCAACTGTCCTGAGGGCCAAATTCAGCCTCAGGAACTTCTCAATTTCGTCAAGTCACAGGCTGATTATATCCTTGGTAAAAACCCGGAGGACATGAGCTACTTGGTTGGATATGGACCAAAATATCCTATTCATGTTCATCACAGAGGCGCTTCCATTGCTTCAGTCTTTTCTCTTCACTCTGAGGTTGGTTGCACACAAGGATTCGACGCGTGGTATAACCGTATTCAGCCAAATCCTAATGTCATCTATGGAGGCCTTGTAGGGGGTCCAGATAGAAATGATGACTACTCTGATGACAGATCCAATTATGAACAAACTGAACCTACAATTTCAGGTTCTGCTCCTCTTGTAGGGATTTTCGCTAAACTGCAAAGTTCATATGGTAATATTGGTTCCTACCATAATGAATCACCATTGCCCCAGAGAAAAAATCCAAGTACAGCATACCTTTCTAAAGAACTTACACATAAAACACCACAAGGGGCACCAGTTGAATTCCTGCACTCAATTTCCAGCTCGTGGACTGTTGGTACTACAACTTACTACAGACACAAGGTGATAATCAAGAACACTTCTGTAAAGCCGGTCTCCGATCTTAAGTTGGTGATTGAGAATCTCTCAGGCTCTGTATGGGGTCTGTCTCCAACTGGAGAGAAGAACACCTATGAACTTCCCCAGTGGCTCAAGGTCTTGAATCCTGGCTCTGAATGTATATTTGTTTATGTTCAAGGTGGACCCCAAGCAAAAATCTTGATTCAAAGCTTCCACTAA 1890 0.4423 MTLITPKILQGSDLDTPVVLVGLGGSVASGFNYGDALDKSLMFFEAQRSGKLPMQEQRIKWRADSGLKDGIQQGVELVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFSKEMTDLNQIGHTLRAIKWGTDYFVKAHTQPNVLWGQVGDGVSDHYCWERAEDMTTSRTAYKIDEQHPGSDLAGETAAALAAAAIAFRTYNSSYSNLLLVHAKQLFTFADRYQGLYDESISCAHQFYASSGYSDELLWAAAWLHQATGDEYYLKYVVDNAVYMGGTGLAVKEFSWDNKYAGVQTLLSKVLLEGKAGPYASTLKQYQAKADYFSCACLQKNDGYNVQKTPGGLLYLHDWNNMQYASSAAFLLAVYSNYLSAAKAQLNCPEGQIQPQELLNFVKSQADYILGKNPEDMSYLVGYGPKYPIHVHHRGASIASVFSLHSEVGCTQGFDAWYNRIQPNPNVIYGGLVGGPDRNDDYSDDRSNYEQTEPTISGSAPLVGIFAKLQSSYGNIGSYHNESPLPQRKNPSTAYLSKELTHKTPQGAPVEFLHSISSSWTVGTTTYYRHKVIIKNTSVKPVSDLKLVIENLSGSVWGLSPTGEKNTYELPQWLKVLNPGSECIFVYVQGGPQAKILIQSFH* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4068 629 PANTHER ENDO-1,4-BETA-GLUCANASE 26 584 - -
Psa7g4068 629 PANTHER ENDOGLUCANASE 5 26 584 - -
Psa7g4068 629 SMART CBM49_2 537 617 IPR019028 GO:0030246
Psa7g4068 629 SUPERFAMILY Six-hairpin glycosidases 30 502 IPR008928 GO:0005975
Psa7g4068 629 Pfam Carbohydrate binding domain CBM49 538 616 IPR019028 GO:0030246
Psa7g4068 629 Pfam Glycosyl hydrolase family 9 33 492 IPR001701 GO:0004553|GO:0005975
Psa7g4068 629 Gene3D - 30 500 IPR012341 GO:0005975
Psa7g4068 629 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 395 421 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4068 Psa-Chr7 334428450 334432821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4068 31 629 Glycoside Hydrolase AT1G48930 69.000 0.0 827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4068 7 334428450 334432821 Psa7g4068 7 334428450 334432821 ECH