Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4054 ATGGCACCAGAGGTTATAGAAATGTCTGGCGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACAGTTATTGAGCTTCTTACATGCGTGCCTCCTTATTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAACACCCTCCAATTCCTGATAGTCTTTCGCCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGACCTGATGCTAAAACGCTGTTGTCTCACCCCTGGATTCAAAATTGCAGACGTGTCCTGCAGTCTTCTCTTCGTCATAGTGGATCATTAAGAAATATAGAGGAAGATGATTCTGCTGTTGGAAAAGTTTCTGGTGGTGATCGTAAGCTTGCAGGTGAAAACTCTTCTGTGGAGAAACAGGGCACTGTGGCTGCTGATAGCAGCAGATCCCAAGATGAAAGTGCCTCAGATTCTAATTTTCCAAACGAAAAAACTGAAAAGGCAGATGATTTCTCATCAGATGAGGTTTTTACCTTAGCCATTCATGAGAAGTCCTTTCAACAAACTGGTTCTGGCAAACTCTCTCATGATGGAGAAGTGGGTAGTTCTGAGCCTACTGGTAATCATGAAATTTCAAATGCCAAAGAACTTCATGAAGTCACGATGAATGGAGAAGTTGGATCACCACAGTCAAGAGGAGGGGCTAATAAAGTTGGAGTAAAAGACAGTTCTAACAATAATGGCAAAAAATCATTTGCTTTTGGACCAAGAGGACTTGATAAAGGTCCCACAAAGGCAATGAAGACACTGCACCCTGCAGAAGGAAATGAGCTGAGCAAATTTAGTGACCCTCCAGGAGATGCCTACTTGGATGATTTATTTCCTTTAGACAAACGACATGGGGAGGTTGTAGGTGAGGCATCCACATCTGCATCAACTTCACACATGGCAAAAGGCAATGCATCTTTGATTGACGGAGGAGAAAAAGACCTAGCCAAAGAGTTGAGGGCTACAATCGCAAGAAAGCAATGGGAGAAAGAGAGTGAAATTGGACAGGCAAACAACGGTGGGAACCTTTTACACCGAGTTATGATAGGTGTTCTAAAAGACGATGTGATTGATATAGATGGTTTGGTATTTGATGAAAAACTTCCTGGAGAGAACCTTTTTCCTCTGCAGGCCGCTGAGTTTAGCAAATTAGTTGGTTCATTAAAACCCGAGGAATCAGAAGATGTGATTGTCTCTGCCTGTCAGAAACTCGTTGGTATATTTCAGCAGCGCTCGGAGCAGAAGCTTGTTTTTGTTACCCAGCATGGTTTACTTCCTCTAACTGACCTGCTTGAAGTTCCTAAAACACGTGTCATATGTTCTGTACTTCAGCTTCTAAATCAAATAATTAAAGACAACACTGATTTTCAAGAAAATGCTTGTCTTGTTGGATTGATTCCTGCAGTCATGAGCTTTGCTGTACCTGATCGTCCCCGGGATATTCGTATGGAAGCAGCTTTTTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACGTTACAAATGTTTATAGCTTGCCGAGGAATACCTGTTTTGGTGGGATTTCTCGAAGCTGATTATGCCAAGTACAGGGAAATGGTCCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAGTCAACGCCTAGAAATGATTTTTGTCGGATAGCTGCAAAAAATGGCATACTCCTTAGGCTTATAAATACCCTTTATAGCTTAAATGAGTCAACCCGGTTAGCATCTATGTCTGTTGGGGGAGGTTTTTTAGTGGATGGTTCGATTCCACGACCACGTTCTGGTATCTTGGATCCTACTCATCCTTATTCAAGTCAGAATGAGGCACTGCTGTCTTCAGCAGATCAGCAAGATCTTTCTAAATTAAGGCGTGGAGTTCTTGATCATCACTTAGAGCCTTCACATTCTTCATCATCCAATCCTAGAAGATCAGATGCTAACTACCAAATGGATGTTGATAGACCTCAATCAAGCAATGCTGCAGCTGAAGCTGTGCCACTAGAGAAGAGTTTAAATCTTGCATCTAGGGAATCTACAGCAGGTACAATGAAAGAAAGAGAGAATGTGGATCGTTGGAAAAGTGATCCTTCTAAAGCTGATGTTGAACTAAGACAGCAACGTCTTAGTATTTCTGCCAACAGGGCATCAACAGATAGGCCTACAAAGTTGACAGAAACGCCCTCAAACGGGTTATCAGTAACTGGAGTAACTCAGCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCCCCATCTGGGCGTTTATCTGTACAGCTTGAATATGCACGTCAGTTTTCAACGTTAGAAAGACATGAGAGTGTACTTCCTTTGTTACACGCATCTGAGAAGAAAACAAATGGTGAACTGGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAACGTGGAAGGGAAAACGGAAATCTTGACTCCAGTGCTAGAGTGTCTCAAAGAGTTGCTCCCAAGAAATTAGGGACTTTTGGTTCTAGTGAAGGAGCTGCTTCCACATCTGGGATCGCATCTCAGACAGCATCAGGCGTATTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCATCTGGACTACTTTCCCACATGGTTTCATCATTGCATGCAGAAGTTGCAAAAGAGTACCTTGAAAAAGTGGCAGATCTTTTGCTTGAGTTTGCACAAGCGGATACAACGGTGAAGTCTTATATGTGTAGTCAAAGCTTGCTCAGTCGACTTTTCCAGATGTTTAATAGGGTAGAACCACCTATTTTGTTGAAGATACTGAAGTGTATTAATCACCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAGGCAATCAAATACTTGATACCAAACCTTGAACTCAAAGAAGGGTCTCTTGTATCTGAGATACATCATGAGGTCCTGAACGCACTGTTCAACTTATGCAAGATAAATAAAAGGAGACAGGAACAAGCAGCTGAAAATGGAATCATTCCCCATCTAATGCAATTCATCACATCAAATTCTCCCTTGAAACAATATGCATTGCCTCTGTTGTGTGACATGGCGCATGCATCTCGTAACTCAAGGGAGCAGTTAAGAGCTCATGGTGGTTTGGATGTCTATTTGAACCTTCTTGAGGATGAGTTTTGGTCTGTGACTGCACTAGATTCAATTGCTGTTTGCTTAGCCCATGACAATGATAATAGGAAGGTTGAGCAAGCATTGCTGAAGAAAGATGCAGTTCAGAAGCTGGTGAAGTTCTTCCAGTGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGCACGGATCAACACCACTTTGGCTGTTAATGGACTAACGCCATTACTCATTGCAAAGCTTGATCATCAAGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCTGTTTATGAACATCACCCTCAGCCCAAGAAACTGATTGTGGAGAACGATCTACCTGAAAAACTTCAAAACTTAATAGGGGAACGCAGAGATGGGCAAGTGTTGGTCAAACAGATGGCAACTTCATTACTTAAAGCATTACATATAAACACCGTTTTGTAA 3648 0.4202 MAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLHQCFKKDARQRPDAKTLLSHPWIQNCRRVLQSSLRHSGSLRNIEEDDSAVGKVSGGDRKLAGENSSVEKQGTVAADSSRSQDESASDSNFPNEKTEKADDFSSDEVFTLAIHEKSFQQTGSGKLSHDGEVGSSEPTGNHEISNAKELHEVTMNGEVGSPQSRGGANKVGVKDSSNNNGKKSFAFGPRGLDKGPTKAMKTLHPAEGNELSKFSDPPGDAYLDDLFPLDKRHGEVVGEASTSASTSHMAKGNASLIDGGEKDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAAEFSKLVGSLKPEESEDVIVSACQKLVGIFQQRSEQKLVFVTQHGLLPLTDLLEVPKTRVICSVLQLLNQIIKDNTDFQENACLVGLIPAVMSFAVPDRPRDIRMEAAFFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASMSVGGGFLVDGSIPRPRSGILDPTHPYSSQNEALLSSADQQDLSKLRRGVLDHHLEPSHSSSSNPRRSDANYQMDVDRPQSSNAAAEAVPLEKSLNLASRESTAGTMKERENVDRWKSDPSKADVELRQQRLSISANRASTDRPTKLTETPSNGLSVTGVTQQEQVRPLLSLLEKEPPSGRLSVQLEYARQFSTLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSQRVAPKKLGTFGSSEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLHAEVAKEYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDEFWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIAKLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4054 1215 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 1175 - -
Psa7g4054 1215 MobiDBLite consensus disorder prediction 131 154 - -
Psa7g4054 1215 MobiDBLite consensus disorder prediction 222 258 - -
Psa7g4054 1215 SUPERFAMILY ARM repeat 393 589 IPR016024 -
Psa7g4054 1215 MobiDBLite consensus disorder prediction 666 711 - -
Psa7g4054 1215 Gene3D - 869 1212 IPR011989 -
Psa7g4054 1215 SMART arm_5 954 998 IPR000225 GO:0005515
Psa7g4054 1215 SMART arm_5 423 463 IPR000225 GO:0005515
Psa7g4054 1215 SMART arm_5 1000 1039 IPR000225 GO:0005515
Psa7g4054 1215 Gene3D - 384 597 IPR011989 -
Psa7g4054 1215 Gene3D Transferase(Phosphotransferase) domain 1 1 106 - -
Psa7g4054 1215 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4054 1215 SUPERFAMILY Protein kinase-like (PK-like) 1 90 IPR011009 -
Psa7g4054 1215 Pfam Protein kinase domain 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4054 1215 PANTHER MAP KINASE KINASE KINASE 1 1175 - -
Psa7g4054 1215 MobiDBLite consensus disorder prediction 724 746 - -
Psa7g4054 1215 SUPERFAMILY ARM repeat 882 1208 IPR016024 -
Psa7g4054 1215 MobiDBLite consensus disorder prediction 182 204 - -
Psa7g4054 1215 MobiDBLite consensus disorder prediction 113 166 - -
Psa7g4054 1215 MobiDBLite consensus disorder prediction 233 247 - -
Psa7g4054 1215 MobiDBLite consensus disorder prediction 693 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4054 Psa-Chr7 333461076 333491988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4054 1 1215 MAP Kinase Kinase Kinase AT3G13530 67.742 0.0 1602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Psa7g4054 Pkinase 9.1e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4054 7 333461076 333491988 Psa7g4054 7 333461076 333491988 ECH