Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa7g3069 | ATGTTTGGTTCAAAGAAATCTCCTTTGAAAGATGCTAAACCTAGTTCTAATGAAGACAAAAAGTATAAACCTTCAAGGAAGATTTCTTCTGAGTATAACTTAGTTCAGGGAGAAACTAATACCAATCCGTTTGATGACGGTGATGTTCATCATGTCCGATCTTCGTCGTCGTCTTATGCTCCGTCGTATGGAAATCGGAACATGTATAAGAACGATTTCCGTGAATCTGGGGGATTGGAGAGTCAGTCAGTGGAGGATTTGGAGAATTATGCTGTTTACAAGGCGGAAGAGACTACGAAATCGGTAAACAATTGTCGGAAGATAGCGGAGGAGATGCGAGAGGAGGCTTCCAAGACGTTGGTTATGTTGCATCATCAAGGCGAGCAGATTACAAGGAGTCACGATATTGCTGCTGGCATTGACCATGATTTAAGTCGGGGAGAAAAGCTTTTGGGAAGTCTTGGTGGCATGTTCTCCAAAACATGGAAACCGAAGAAGACCGGCGTAATAAAAGGCCCAACCATATTTTCCGATGATCCGGTCCGAAGAAGCGCCAACCACTCTGAGCAACGAGAGAAGTTGGGATTGAATTCTGCCCCTAAAGGACAGTCAAACCCAAGAAGAGCCATTTCGGAGCCAACTAATGCATTTGAAAGAGTCGAGGTTGAGAAAGGGAAGCAAGATGATGCACTATCTGATATAAGTGATTTGTTGGGAGAACTTAAAGGCATGGCCATTGACATGGGATCTGAAATTGACAAGCAAACCAAAGCCATAGATGGATTTGAAAAGGATACCGAGAAGTTGAACGACCGCATGAATGGCGCCAATCGACGCACTCGTCATTTACTTGGAAAATAG | 861 | 0.4379 | MFGSKKSPLKDAKPSSNEDKKYKPSRKISSEYNLVQGETNTNPFDDGDVHHVRSSSSSYAPSYGNRNMYKNDFRESGGLESQSVEDLENYAVYKAEETTKSVNNCRKIAEEMREEASKTLVMLHHQGEQITRSHDIAAGIDHDLSRGEKLLGSLGGMFSKTWKPKKTGVIKGPTIFSDDPVRRSANHSEQREKLGLNSAPKGQSNPRRAISEPTNAFERVEVEKGKQDDALSDISDLLGELKGMAIDMGSEIDKQTKAIDGFEKDTEKLNDRMNGANRRTRHLLGK* | 287 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa7g3069 | 286 | Gene3D | - | 78 | 156 | - | - | |
| Psa7g3069 | 286 | PANTHER | SYNAPTOSOMAL ASSOCIATED PROTEIN | 1 | 286 | - | - | |
| Psa7g3069 | 286 | MobiDBLite | consensus disorder prediction | 263 | 278 | - | - | |
| Psa7g3069 | 286 | MobiDBLite | consensus disorder prediction | 29 | 43 | - | - | |
| Psa7g3069 | 286 | CDD | SNARE_SNAP25N_23N_29N_SEC9N | 89 | 153 | IPR044766 | GO:0005484|GO:0031201 | |
| Psa7g3069 | 286 | SUPERFAMILY | SNARE fusion complex | 82 | 152 | - | - | |
| Psa7g3069 | 286 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
| Psa7g3069 | 286 | MobiDBLite | consensus disorder prediction | 11 | 27 | - | - | |
| Psa7g3069 | 286 | MobiDBLite | consensus disorder prediction | 173 | 215 | - | - | |
| Psa7g3069 | 286 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 221 | 283 | IPR000727 | - | |
| Psa7g3069 | 286 | Coils | Coil | 95 | 115 | - | - | |
| Psa7g3069 | 286 | Gene3D | - | 206 | 286 | - | - | |
| Psa7g3069 | 286 | SMART | tSNARE_6 | 216 | 283 | IPR000727 | - | |
| Psa7g3069 | 286 | SMART | tSNARE_6 | 87 | 154 | IPR000727 | - | |
| Psa7g3069 | 286 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 286 | - | - | |
| Psa7g3069 | 286 | MobiDBLite | consensus disorder prediction | 263 | 286 | - | - | |
| Psa7g3069 | 286 | SUPERFAMILY | SNARE fusion complex | 220 | 284 | - | - | |
| Psa7g3069 | 286 | CDD | SNARE_Qc | 226 | 279 | - | - | |
| Psa7g3069 | 286 | Coils | Coil | 252 | 279 | - | - | |
| Psa7g3069 | 286 | MobiDBLite | consensus disorder prediction | 191 | 211 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa7g3069 | Psa-Chr7 | 223762807 | 223765506 | Dispersed |
Event-related genes