Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3036 ATGGGACAAAATCAAAGATCTCTGATCTACGCGTTCGTTTCTCGAGGAAGTGTTCTTCTCTCCGAGTACACCGAATTCAGCGGAAATTTCAATTCCATCGCGTTTCAGTGTCTTCAGAAGCTCCCAGCTTCTAACAACAAATTCACCTACAACTGTGATGGTCACACCTTCAATTACCTCGTCGATAATGGCTACACGTATTGTGTTGTTGCGGATGAATCGGTTGGAAGACAAGTGCCTGTGGCTTTTCTGGAGCGTGTGAAGGATGATTTTGTTGCGAAATATGGCGGTGGGAAGGCTTCTACTGCTGCACCTAACAGTCTTAATAAGGAATTTGGGCCTAAATTGAAGGAACATATGCAGTACTGTGTTGATCATCCTGAGGAGGTGAGCAAGCTTGCTAAGGTGAAAGCTCAGGTTTCTGAAGTCAAAGGTGTCATGATGGAGAATATTGAAAAGGTTCTGGACAGGGGGGAAAAGATAGAGCTTTTGGTTGACAAGACTGAGAACCTTCATCACCAGGCACAAGACTTCAGGAACTCAGGGACCAAAATCCGCAGAAAAATGTGGCTGCAGAATATGAAGATAAAGCTGATTGTATTGGCAATTTTGATAGCCTTGATTCTCGTAATTGTCCTCCCAATCGTTCTTCGGAATAAATAA 663 0.4359 MGQNQRSLIYAFVSRGSVLLSEYTEFSGNFNSIAFQCLQKLPASNNKFTYNCDGHTFNYLVDNGYTYCVVADESVGRQVPVAFLERVKDDFVAKYGGGKASTAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIKLIVLAILIALILVIVLPIVLRNK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3036 220 SUPERFAMILY SNARE-like 8 123 IPR011012 -
Psa7g3036 220 ProSitePatterns Synaptobrevin signature. 150 169 IPR001388 GO:0016021|GO:0016192
Psa7g3036 220 SMART Longin_2 33 115 IPR010908 -
Psa7g3036 220 CDD R-SNARE 132 190 - -
Psa7g3036 220 PRINTS Synaptobrevin signature 137 156 IPR001388 GO:0016021|GO:0016192
Psa7g3036 220 PRINTS Synaptobrevin signature 157 176 IPR001388 GO:0016021|GO:0016192
Psa7g3036 220 PRINTS Synaptobrevin signature 193 212 IPR001388 GO:0016021|GO:0016192
Psa7g3036 220 Pfam Regulated-SNARE-like domain 36 113 IPR010908 -
Psa7g3036 220 PANTHER SYNAPTOBREVIN, LONGIN-LIKE DOMAIN PROTEIN-RELATED 1 172 - -
Psa7g3036 220 PANTHER SNARE PROTEINS 1 172 - -
Psa7g3036 220 Gene3D - 130 215 - -
Psa7g3036 220 SUPERFAMILY SNARE fusion complex 127 194 - -
Psa7g3036 220 ProSiteProfiles Longin domain profile. 12 116 IPR010908 -
Psa7g3036 220 Gene3D Longin domain 2 129 - -
Psa7g3036 220 Pfam Synaptobrevin 131 216 IPR042855 -
Psa7g3036 220 CDD Longin 9 123 IPR010908 -
Psa7g3036 220 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 132 192 IPR042855 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3036 Psa-Chr7 220981248 220986743 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3036 7 220981248 220986743 Psa7g3036 7 220981248 220986743 ECH