LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g3001	ATGGGGTTTAATGATAAACACAACAATGCTGGTGGAAGCGATCCGGATTTTGGTGCAATCTTTATGTCAAACAGTGCAACGAAAAGAGAATGTTTAAGGAGTGGGTTGTTTGGGCTTCCGGCTTCTTATATTCCATTTGTAGAGAAGGTTAAAGCCGGGACGACTTTGTTTTTATTTGAATATGAGAAGAAACTACTTCACGGGGTTTTTATGGCTACTTGTGATGGAGGAATCAATATTGTTCCTAAAGCGTTTGCTTTGACAGGGATGAAATATCCTGCTCAGGTTAAATTTGTTCCAGTTTGGGAATGTAAGCCAATCCCTGAAAAGATATTCCGTCATGCAATCAGAGAGAATTACTTTGCCAATAACAAGTTTAGCTTCGGGCTATCTGAAAATCAGGTGGAAAAACTTTTACATTTGTTCAACATGAACAAGCTAGTACCGGAGGTTCCTAGGAGACATATGTCTATGAAATCAGAGCGGTACCCAATGGGTGAAGTTGGAAAATCTGTTGGTCGTGGAATGCTTGGCGAAAGTGTTCAAGATGATCCAAGAGATTCTGCACGCTTCAATGGATTCAGTGCAGATGATATTTTAGCAAGCAAACGAAGAAGGTCTTTGGAGCTTGGAGTGGATTATATAAGTGGAGATGTTCGTGATTATTTGCGATCAAAAGATGAAAGCAGACTTGCTGCACGTAACAATAATGTTGGAAGACCTGTTGGTTGTGGAATGCTTGGCGAAAGTGTTCAAGCTGATCATGTTTTGGGTGATAATAATTTACCTGCTTTGATGCATAATTACCCAGGAGACTCTGCATGCTACGATGGATTCAGTGCAGATGAGGTTTTAGTAAACAAACGAAGAAGGTCTTCGGAGCTTGGAGTGGATTATATAGATGCTCGTGAATATTTGCAATCAAAAGATGAAAGCAGACTTGCTGCACACAACAATGAAGATTATATAGATAACTATAACTATGCTGCCAAGCTCCCGCTGGATACTGCAAGTGGATACGTTGGCGATTATTCGGCAATAAGAGATTACAGCAGGTTTTCGTCCCACGAGAACAAAGATTATACGGATACACATCTCAGGCCATACACCACAGGTGGATACTGCAAAATTCCTTCCGACAAAATTAGAGTTCATGGTGATGGCAGGCCATCAGTTAGTGACCCTCTGATGGGTGAAGATCTAAGGAAGACTGATAAGAGGATGATATTTTCGGATGATATTCCTAGTTTACGTGGTTCCAATTCTTTGGTTGAAAATCATCTCAGGTCAACTTCTGCTATGATTCACCCGTTCCATCTAAACTCTTGTGCACCACAAGGAAACGAGAGTTCTATCCCGTTCCATCTAAACTCTTGTGCACCAAAAGGAAACGAGAGTTCTATCCCGTACAATTCAGAAGCTCCTGGCTTCTTGTCTTTTGGAATTGATAATGGTTCTGAGTCAATGAAGTCAATGAGACCACAAGGAGAAGAGAGTTCTATCCTGTACAATTCAGAAGTTCCTTGCTTAAACTTCAGACAATCATCATCGTTTGGAATTAATAATGATTCTGAATCAATGAGAGAAAGATTTTCTCCTTCAACAAACTGCCGAAGGAATTTAGTGAGTAGGGAACGACAACGCATGCATGCAGAACTGAAAGACAGTCACAGATGGAACGGTATTGATGATTGTTTTTCAAATTCTGTATTGTATGCTAGCAACAGGGATTGCATGCCTTTCAACGAAACTCGAAATTCTGACCAATTGGCATCAGAATCTGCTTTATATGAGGCTCACAATACAATTCCTTCCTTTAAGTCTTCACCAGCTCCCCTCCCTTCTTCAGATATTGGAAATAGTGGAAGGACACATGAATCATATTCTTCATTGTTCTGTGACCACAAATCATATTTGGACAATAATGTTCATCCCATGGAATTGCAAAACTATCTGAGTCATGAGATAACACTACCAAAAAACAATGAAATGCTAAATCCATATGTTGATTCAGTGCCATTGGATCATGGATATGATATTGGATGTTATAGTGATTCTCAAAATAGCAATTGCGGTCATCCAAATAGAAAAAGTAGTGTGTTTTCTCGTTTATCTCTTGTCCAGGATGTTAACAAACAAGGAAAGGGAAACAATGGACAGAATGAAGAATATGATTTCATTACTTCAGTTGATGAAGTGATGGAAATGGTTCGTCAGACAAAAAGAAAGCCAAAGCCCAGTCATCACAACAATGCAGAAAGTGTGAGGGGAAAAACTCAAATCAGTAATCAGAGGAAGAAGAGTGATTGCCTTGAAAGTGCATTGGAACACAACAAGGATGAAAGTTTGAGGAGTAAAACTGAAATGGGTAGTCCGAGGAAGATGAGAGACTGCTTAGAAAATGCCTTGGAACACAGTGAGGATGAAAGTTTGAGGAATAAATCTCAAATTAGTAGTAGTCTGAAGAAAAAAAAGAGGGGGGATTGTTTTGAAAGTTCCTTGGAAGATCTAAATATGGATTCCACAACTGTGACTGGGGGCAGTCCTAAAACAAAAGCTGATAAGGCCCATTTTGTTGATTTCAAGCGTCGAAGCATGGTGAGGAAACATAATGATGAGATTGAGAGAAACTCTAATGAGAGTAAAAAGAGTGAGAACTTGGGGTTTGTGCAACAAAAGAAAAGAAAGTTAATCCGACCAAATTTCAACAAGAGTGCATCTTTTGAAGACAAAGAAGACCTTGGTGCTTCTCAAAATTTTCAACTACCATTGCCAAATGGAATTCGTAATCATAAAGATGTCAATGAAAGTTGTAGTACACTGGTGAACCAATGTGGTTATGATGTTAAAGCAGAGGCTGAAGTGCAAAATGTCATTGATCCAAAACATTCTGAAGGCAAGGATAGTAGTCATGCTAAAGAATTTATCTGTAGCAAAGAGGGAGAAAAATCTAAATTTCAAAATGTTGTGTCCTCAGCTTCTTGCAATAAGGAGAGTTCTTATACCAAGGAAAATCCATGTATGATGGATAATGTGAAGTCATCATCTCTGGAGATGGAATGCTTGCGTGCAATTTGTCAAGAAAAAGCAAATGTGGGCACCCTTTGTTCCTTAAATGATAGATCAGAATGCGTGGATAACAAAAATCACCAAAAGGGTTTGTCCTCGGCTTCTTTCAAAGAAGAGAGTTCTCATGCCAAGGAAGGTTCAAGTCTGATGCATAATAAGAAGCCAGCATCTCTGGAGATGGAATCCTTGCATGCAATTAGTCATGAAAAAGCAAACTTTGGAACCCTTGTGGTATTAAATGATGTATCTGAATGTGCGGATAACAAAAATCACCAAAAGGTTTTTTCCTCAGCTTCTTGTGAAGAAGAGAGTTCCCATACCAAAGAAGGTTCATGCATGATGGGTATTGTAAAGTCAGCATCTTTGGAGACACCGCATGCAATTTGTCCAGAAAAAGAAAGCATTGGCACCCTTCCTCCATTAAATGATGGATCAGAATGTTTGGATGACAAAAATCACCTAAAGTTCTTGTCCTCAGCTTCCTGCAAAGAAGAGAGCTATCATACCGAGGAGGGTTCATGTATGATGGATAGTAAAAAATCAGCATCCCTGGAGAAGGAATCGTTGAATTCAATCTGTCAAGAAAATAATGCAGATAAGTTCATATGTGCTGACAGAGGTATTGATCCTGATGGTGAAATGCCAAAAGATTGTGGCTTCTTCTCCATTGAAGCTAAAGATGGATGTGAGTATTTAGGCAACTCTGGTAGTGAAAAAGCTCCAATTGAAACTTGTCACGTTGAGGCTTGCATATAG	3825	0.3929	MGFNDKHNNAGGSDPDFGAIFMSNSATKRECLRSGLFGLPASYIPFVEKVKAGTTLFLFEYEKKLLHGVFMATCDGGINIVPKAFALTGMKYPAQVKFVPVWECKPIPEKIFRHAIRENYFANNKFSFGLSENQVEKLLHLFNMNKLVPEVPRRHMSMKSERYPMGEVGKSVGRGMLGESVQDDPRDSARFNGFSADDILASKRRRSLELGVDYISGDVRDYLRSKDESRLAARNNNVGRPVGCGMLGESVQADHVLGDNNLPALMHNYPGDSACYDGFSADEVLVNKRRRSSELGVDYIDAREYLQSKDESRLAAHNNEDYIDNYNYAAKLPLDTASGYVGDYSAIRDYSRFSSHENKDYTDTHLRPYTTGGYCKIPSDKIRVHGDGRPSVSDPLMGEDLRKTDKRMIFSDDIPSLRGSNSLVENHLRSTSAMIHPFHLNSCAPQGNESSIPFHLNSCAPKGNESSIPYNSEAPGFLSFGIDNGSESMKSMRPQGEESSILYNSEVPCLNFRQSSSFGINNDSESMRERFSPSTNCRRNLVSRERQRMHAELKDSHRWNGIDDCFSNSVLYASNRDCMPFNETRNSDQLASESALYEAHNTIPSFKSSPAPLPSSDIGNSGRTHESYSSLFCDHKSYLDNNVHPMELQNYLSHEITLPKNNEMLNPYVDSVPLDHGYDIGCYSDSQNSNCGHPNRKSSVFSRLSLVQDVNKQGKGNNGQNEEYDFITSVDEVMEMVRQTKRKPKPSHHNNAESVRGKTQISNQRKKSDCLESALEHNKDESLRSKTEMGSPRKMRDCLENALEHSEDESLRNKSQISSSLKKKKRGDCFESSLEDLNMDSTTVTGGSPKTKADKAHFVDFKRRSMVRKHNDEIERNSNESKKSENLGFVQQKKRKLIRPNFNKSASFEDKEDLGASQNFQLPLPNGIRNHKDVNESCSTLVNQCGYDVKAEAEVQNVIDPKHSEGKDSSHAKEFICSKEGEKSKFQNVVSSASCNKESSYTKENPCMMDNVKSSSLEMECLRAICQEKANVGTLCSLNDRSECVDNKNHQKGLSSASFKEESSHAKEGSSLMHNKKPASLEMESLHAISHEKANFGTLVVLNDVSECADNKNHQKVFSSASCEEESSHTKEGSCMMGIVKSASLETPHAICPEKESIGTLPPLNDGSECLDDKNHLKFLSSASCKEESYHTEEGSCMMDSKKSASLEKESLNSICQENNADKFICADRGIDPDGEMPKDCGFFSIEAKDGCEYLGNSGSEKAPIETCHVEACI*	1275

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g3001	1274	ProSiteProfiles	DCD domain profile.	14	144	IPR013989	-
	Psa7g3001	1274	PANTHER	DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED	1	1049	-	-
	Psa7g3001	1274	PANTHER	DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN	1	1049	-	-
	Psa7g3001	1274	Pfam	Development and cell death domain	18	142	IPR013989	-
	Psa7g3001	1274	MobiDBLite	consensus disorder prediction	1055	1074	-	-
	Psa7g3001	1274	SMART	dcd	13	144	IPR013989	-
	Psa7g3001	1274	MobiDBLite	consensus disorder prediction	871	893	-	-
	Psa7g3001	1274	MobiDBLite	consensus disorder prediction	871	892	-	-
	Psa7g3001	1274	MobiDBLite	consensus disorder prediction	739	825	-	-
	Psa7g3001	1274	MobiDBLite	consensus disorder prediction	760	812	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g3001	Psa-Chr7	218364000	218368913	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa7g3001	7	218364000	218368913	Psa7g3001	7	218364000	218368913	ECH