Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2992 ATGGCAGCGACGGTTCCTTTCTCTCTTATTAGAAACTACTCGCAATTGGTGTCTACAAGAGCTTTTCTTGTAAAAGCGAACAGCTACAATTTCTCCAACTCTGTTCTTCCTATCCAATGTCGTAGGTTGCGTTTTAGTGCCTGTGCTGCAAACAACGAACAAGCAGCAGCCAGAGCAGCTGCTATTAATGCTGATAGTGGAGCTCCAACAATATTTGACAAGATTATAAATAAGGAAATCCCTTCTAGTATTGTATATGAAGACGAAAAGGTCCTCGCCTTTCGGGACATCAGTCCACAGGCTCCGGTTCATGTTCTGATCATTCCAAAATTCAGAGATGGATTAACAGAGCTTGGGAAGGCTGATGCTAGACATGGGGAGATACTCGGTCAGCTTCTCTATGCAGCGAAAATAGTAGCCGAGAAAGAAGGTATCGCCGATGGATTTCGTGTTGTTATTAACAGTGGTGCCAGTGCCTGCCAAAGTGTGTATCATTTGCACTTGCATGTTCTAGGTGGGAGACAGATGAGTTGGCCACCTGGTTAA 546 0.4451 MAATVPFSLIRNYSQLVSTRAFLVKANSYNFSNSVLPIQCRRLRFSACAANNEQAAARAAAINADSGAPTIFDKIINKEIPSSIVYEDEKVLAFRDISPQAPVHVLIIPKFRDGLTELGKADARHGEILGQLLYAAKIVAEKEGIADGFRVVINSGASACQSVYHLHLHVLGGRQMSWPPG* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2992 181 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 41 181 - -
Psa7g2992 181 PANTHER HISTIDINE TRIAD HIT PROTEIN 41 181 IPR001310 -
Psa7g2992 181 CDD PKCI_related 69 173 - -
Psa7g2992 181 Gene3D - 49 181 IPR036265 -
Psa7g2992 181 PRINTS Histidine triad family signature 71 87 IPR001310 -
Psa7g2992 181 PRINTS Histidine triad family signature 92 110 IPR001310 -
Psa7g2992 181 PRINTS Histidine triad family signature 161 171 IPR001310 -
Psa7g2992 181 ProSitePatterns HIT domain signature. 154 172 IPR019808 -
Psa7g2992 181 SUPERFAMILY HIT-like 69 180 IPR036265 -
Psa7g2992 181 Pfam HIT domain 78 175 IPR011146 GO:0003824
Psa7g2992 181 ProSiteProfiles HIT domain profile. 71 181 IPR011146 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2992 Psa-Chr7 217947632 217950280 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2992 7 217947632 217950280 Psa7g2992 7 217947632 217950280 ECH