Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2964 ATGGATGATGAAGTTGTTCAGCGAGTTTTCCATGAAGGAGGACGCGATTACTTCCAACAACAGCCTTCAACTTCTTCCTCTTCCTCATCCATTCTTCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATCCAAGAACTCCGAGAGAAGAAAGATGGCCTTGTTACAGTTGGCATTGGTGGTCCAAGCGGTTCTGGTAAAACAAGCTTAACAGAGAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATTGTGATGGAGTTGATGAAGGAAATGTTCTGGATTCTATAGATTTTGTTACCCTTATCAAGAATCTTGAGGATTTGACAAAAGGCGAGGATACATTAATTCCAGAGTTTGATTATCAGCAAAAGAGATGCATAGGCTATAAAAAAATAATGAGTACTTCATCTGGAGTGGTAATAGTTGATGGTACATACGCATTGCACGCAAAACTGCGGTCTTTACTGGATATTCGAGTTGCAGTGGTTGGTGGTGTTCATTTTAGTCTACTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCATTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAACAACAGCTTTGTGTCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGCAAGTCTTCAGATGGATATCCTGGTTCTTCCTCTCAAGGAAATCAAGCTCAAACAGATAATTTTATTGAAATGTACCTTAGACCACCTTCGGCTAGTGAAGAAGCAGGGATAAATGATTGGATTAAAGTGCGGCAGTCTGGAATTAGGTATTATTTATCCCTTGGTGACCAGAGGATTGTTGACAAGAATTTCATTATCAGGCCAAAAGCTGAGTTTGAGGTTGGACGAATGACATTGGGTGGGTTGCTGGCTCTTGGGTACATTGTGGTGGTTAGTTATAAACGCGCATCCACAACTGTCAATTATGGCAAGGTTTCAATGTCGTTTGAAACCATTGATGTTCTTGGCGAGACATTCTTGGTCACGAGAGGAACTGATAGGAAGACTGTTGGAACAGAAGCATTGAAGATGGGTATCAATGGACCTTGGATTACTAAATCATATCTTGAAATGATTCTTGAGAGAAAAGGTGTACCCCGTCTTAGTACACCACCACTTGTGTCTAATACAACTGTGACTGGCAGTCAAGAAACAACAATCGTTGCACCAAAGCCAATTCGTGTTACCCCTAACCTTGTTACTGGCCTCGAGGATTTATCTCAGCCATGGACCCGATCCCCAACAAAATCAAAAATAGAACCTTTTCTGGCTACATGGCGTTTCATGTCTACAGATTCCTCCCATATTGACAACACAGTCCTAGATCCCTCATCTTTCAGGGACACCGTTAGGCTTGCTCCCATGCCTGATTCATATGACCTGGACAGGGGGCTGCTATTGTCAGTTCAAGCAATACAAGCTTTGTTGGAGAATAAAGGTGTTCCAGTCATTGTTGGAATTGGTGGTCCAAGTGGGTGTGGGAAGACAAGTTTGGCTCATAAAATGGCAAATATTATTGGTTGTGAAATAATTTCTCTAGAAAGTTATTACAAACAAATAAAGGACTTTAAATATGATGATTTCAACTCACTTGATTTATCTTTGTTATCAAAGAATATTGATGACATAAGAAATGGACGAAGAACAAAAGTACCTATATTTGACTTAGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAGGGCGTCTATGCGTTGCATCCGGATATCCGAATGTCACTTGACTTGTGGATTGCTGTTGTAGGAGGCGTTCATTCACATTTGATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCTATGTTCCAACAACTTATTGAACCCCATCTTGTTCATGCACATCTGAAAATTCGAAACGACTTTGACCCTGTGCTTTCTCCCGAGAGTTCACTGTTTGTATTGAAGAGTAACAAAAAAGTAGCTTATCAAGATATTCTATCCATTCTTGATCCAGCAAAATTTTGCAGTTCAGTGCAGAAATTTATCGATATTTACATGAGGCTTCCTGGGATCCCTTCTAATGGTCAACTGACAGACAGTGATTGTATTCGGGTTAGAATATGTGAAGGCAGATTTGCATTACTGATACGTGAGCCTATCAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTACAACGGTTGCCGGTCTTCTTAACCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTACCAGGATGGAAAGGTCATATGA 2445 0.398 MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVIGCTVISMENYCDGVDEGNVLDSIDFVTLIKNLEDLTKGEDTLIPEFDYQQKRCIGYKKIMSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSKSSDGYPGSSSQGNQAQTDNFIEMYLRPPSASEEAGINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTVNYGKVSMSFETIDVLGETFLVTRGTDRKTVGTEALKMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVTGSQETTIVAPKPIRVTPNLVTGLEDLSQPWTRSPTKSKIEPFLATWRFMSTDSSHIDNTVLDPSSFRDTVRLAPMPDSYDLDRGLLLSVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANIIGCEIISLESYYKQIKDFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILSILDPAKFCSSVQKFIDIYMRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISITTVAGLLNLGYQAVAYIEASAFIYQDGKVI* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2964 814 SMART AAA_5 516 660 IPR003593 -
Psa7g2964 814 SMART AAA_5 61 211 IPR003593 -
Psa7g2964 814 PRINTS Uridine kinase signature 517 534 - -
Psa7g2964 814 PRINTS Uridine kinase signature 544 555 - -
Psa7g2964 814 PRINTS Uridine kinase signature 638 648 - -
Psa7g2964 814 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 421 - -
Psa7g2964 814 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 493 604 - -
Psa7g2964 814 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 604 814 - -
Psa7g2964 814 Gene3D - 516 703 IPR027417 -
Psa7g2964 814 Gene3D - 63 243 IPR027417 -
Psa7g2964 814 Pfam Phosphoribulokinase / Uridine kinase family 519 684 IPR006083 GO:0005524|GO:0016301
Psa7g2964 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Psa7g2964 814 CDD UMPK_like 64 226 - -
Psa7g2964 814 CDD UMPK_like 519 687 - -
Psa7g2964 814 PANTHER URIDINE KINASE 2 421 - -
Psa7g2964 814 PANTHER URIDINE KINASE 604 814 - -
Psa7g2964 814 PANTHER URIDINE KINASE 493 604 - -
Psa7g2964 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 687 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2964 Psa-Chr7 215422914 215443408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2964 512 675 PRT Gene Family AT1G55810 23.596 9.24e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2964 7 215422914 215443408 Psa7g2964 7 215422914 215443408 ECH