Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2962 ATGGACAAAGATTCAACAACCCTCTTCATCAACACCCTTCTTTTCTTCTCATGCTTCTCATTCTCACATTCTTCAACATCATTTCCCAAACAAGCACTTCCCACAAAATCAGGTTACCTTCCAGTCACCTCAACCTCCAATTCCTCCATTTTCTACACATTCTATGAAGCCCAAAACTCATCCTTATCTCTCTCCCAAACCCCACTTCTCATCTGGCTTCAAGGTGGTCCTGGCTGCTCCTCCATGATTGCCAACTTCTACGAACTCGGACCCTACCGTGTCACCAAATCACTCACCCTTCAACCCAACCCTGGTTCTTGGAACAGAATCTTTGGTCTTCTTTTTCTCGATAATCCAATTGGAACTGGCTTCAGTGTAGCCTCAACACCACAAGAGATTCCAACCGATCAAAACGGAGTGGCGAAACACCTTTTCGCCGCTATAACAAGGTTTGTTCAACTTGATCCTGTTTTCAAACATCGTCCTATTTATATCACCGGTGAAAGCTATGCTGGAAAATATGTTCCTGCAATTGGATACTACATATTGCAGAAAAATGCCGAGTTGAAAGAGTTGAAAGAGTCTCAGAGAGTGAATTTAGCTGGTTTGGCAATCGGGGATGGATTAACAGACCCTGTAACACAGGTTGTTACTCATGCTGCTAATGCTTATTACACTGGATTAATCAACGAGAAGCAAAAGAACGAGATGGAAAAAGCTCAGCTTGAAGCTGTTAGATTGGTTGAAAGAGGGAATTGGAGTGAGGCAACTGATGCTAGAAACAATGTATTGAGTTTACTGAGAAACATGACAGGGTTGGCTACTTTGTATGATTACTCAAGGAATGTTCCTTATGATGATGATCTGGTTGAAAAGTTATTGAACATTGCTGAAGTGAAGAAGGCGTTAGGAGTGAAAGTTGACGAATCGTTTGTTTATGAGATATGCAGTGATCTTGTTGGTGATGTATTGCATGATGATGTGATGAAGAGTGTTAAGTTTATGGTGGAGAAGTTGTTGAAAGAGAGTAGTACTAGGTTGTTGTTGTATCAAGGACAACGTGATTTGAGAGATGGTGTGGTTCAAGTTGAGGCTTGGGTGAAGACTATGAAATGGGAAGGGATTGTTGAGTTTTTGAATGGTGAGAGAGAGATTTGGAAGGTGAATGGAGATGTAGCTGGTTATGTGCAAAAATGGAAGACACTTACAAATGTTGTGGTTTTGGGAGGTGGACATCTTTTGCCTAATGACCAACCTTTGAATTCTCAAGCTATGATTGAAGATTGGGTTTTGGAAAAGGGTTTGTTTGGAAGTGTGCCTTATGTTAGTATGTCTTGA 1338 0.4126 MDKDSTTLFINTLLFFSCFSFSHSSTSFPKQALPTKSGYLPVTSTSNSSIFYTFYEAQNSSLSLSQTPLLIWLQGGPGCSSMIANFYELGPYRVTKSLTLQPNPGSWNRIFGLLFLDNPIGTGFSVASTPQEIPTDQNGVAKHLFAAITRFVQLDPVFKHRPIYITGESYAGKYVPAIGYYILQKNAELKELKESQRVNLAGLAIGDGLTDPVTQVVTHAANAYYTGLINEKQKNEMEKAQLEAVRLVERGNWSEATDARNNVLSLLRNMTGLATLYDYSRNVPYDDDLVEKLLNIAEVKKALGVKVDESFVYEICSDLVGDVLHDDVMKSVKFMVEKLLKESSTRLLLYQGQRDLRDGVVQVEAWVKTMKWEGIVEFLNGEREIWKVNGDVAGYVQKWKTLTNVVVLGGGHLLPNDQPLNSQAMIEDWVLEKGLFGSVPYVSMS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2962 445 Gene3D alpha/beta hydrolase 19 436 IPR029058 -
Psa7g2962 445 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Psa7g2962 445 Coils Coil 230 250 - -
Psa7g2962 445 Pfam Serine carboxypeptidase 33 430 IPR001563 GO:0004185|GO:0006508
Psa7g2962 445 SUPERFAMILY alpha/beta-Hydrolases 34 431 IPR029058 -
Psa7g2962 445 PANTHER CARBOXYPEPTIDASE 16 436 - -
Psa7g2962 445 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 436 IPR001563 GO:0004185|GO:0006508
Psa7g2962 445 ProSitePatterns Serine carboxypeptidases, serine active site. 165 172 IPR018202 GO:0004185
Psa7g2962 445 PRINTS Carboxypeptidase C serine protease (S10) family signature 103 115 IPR001563 GO:0004185|GO:0006508
Psa7g2962 445 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 126 IPR001563 GO:0004185|GO:0006508
Psa7g2962 445 PRINTS Carboxypeptidase C serine protease (S10) family signature 151 176 IPR001563 GO:0004185|GO:0006508
Psa7g2962 445 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2962 Psa-Chr7 214673381 214675345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2962 286 430 Calmodulin-binding Proteins AT2G22960 21.233 1.64e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2962 7 214673381 214675345 Psa7g2962 7 214673381 214675345 ECH