Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2951 ATGAATGATTATAACAACGGGGTATTATCGTCATCTTACTACGGTATTCTTGGTGTTAGTTCAGATTCTTCTATAAACGAAATAAGACGCGCGTACAGAAGGCTTGCTATGCAATGGCATCCAGATAGATGGACAAGAACACCGTCTTTACTTAGTGAAGCCAAATGTAAATTCCAGAGAATTCAAGAAGCCTATTCAGTTCTATCGGATCCGAAGAAAAGAACTATGTATGATGCTGGATTGTATGATCCTCAAGAGGAAGAAGATGAGGAATTTAGCGATTTTATGGACGAAATGGCTACCCTTATGGCGGAAGTTAAGCAAGAGGAGAAGGTTTATGGTTTGGATGAATTGCAGGCCATGTTCGTGGAAATGGCTGAAGGATTTGAGACTTCTTCTATGTGTTTTGAGACACCAATGAGGGTTGATGAGTCTTGTGTTAGCAGAGGAAGTGTTTTGACACAATATTAG 471 0.3992 MNDYNNGVLSSSYYGILGVSSDSSINEIRRAYRRLAMQWHPDRWTRTPSLLSEAKCKFQRIQEAYSVLSDPKKRTMYDAGLYDPQEEEDEEFSDFMDEMATLMAEVKQEEKVYGLDELQAMFVEMAEGFETSSMCFETPMRVDESCVSRGSVLTQY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2951 156 CDD DnaJ 13 70 IPR001623 -
Psa7g2951 156 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Psa7g2951 156 Pfam DnaJ domain 13 78 IPR001623 -
Psa7g2951 156 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Psa7g2951 156 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 10 142 - -
Psa7g2951 156 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Psa7g2951 156 PRINTS DnaJ domain signature 14 32 IPR001623 -
Psa7g2951 156 PRINTS DnaJ domain signature 32 47 IPR001623 -
Psa7g2951 156 PRINTS DnaJ domain signature 53 73 IPR001623 -
Psa7g2951 156 PANTHER PUTATIVE, EXPRESSED-RELATED 10 142 - -
Psa7g2951 156 Gene3D DnaJ domain 9 133 IPR036869 -
Psa7g2951 156 SMART dnaj_3 11 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2951 Psa-Chr7 211451196 211452805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2951 13 79 C2H2 Transcription Factor Family AT1G74250 50.000 3.66e-16 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2951 7 211451196 211452805 Psa7g2951 7 211451196 211452805 ECH