Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2651 ATGTTTGGTAATGGTAACTGTGATGTTGATAATGAGAAAACCATAATCACTTCTAGCAAATGGACACAGAGTGAGATAGATGATCATAAGGTTTCAATGGCTTCTTCAACCGGTAATAGGGTTATGGAAAAACCAGGTCAAGAGCTTCTTCAACAACAACAACAAGCTTTAAGATGCCCACGTTGTGATTCATCCAACACGAAATTCTGTTACTACAATAACTACAGTTTAACGCAACCGAGACACTTCTGCAAAGCCTGTAAAAGATACTGGACAAGAGGTGGAACACTCAGAAATGTTCCTGTTGGTGGTGGTTGCAGAAAAAACAAACGTCTTAAACGACCAACATACTCTTGTTCCAACAACAACAACATTGATTCTTCTGCTTCTCCTTCTTCTTCAACTCCTTCTAGTGTTGTTGCTAATCCAAACCCTCCTTCTCAATCTCAACAACAACAACAACAACAACAACAGCACCATAGTTTTGATATTGCTGCTACCTCAAACCATATCAATACTATGCTTTATGGTAATAACTCTTGTCATGATGTTATGAATTTTCCTTTTTCAACAAGGTTTAATTCTACTACTAGAGTTTCAAATCCTGCTTCTGGTTATGATAATCTTCACCAGAATGGTCTTGGATTAGGTTTTTCATCTGGGATACTAATGTCTGCTGCTGGAGGAGAAGTTAATCTTAATCATCATCATCATCATCACCATGATGAGGGTAGTTACAGAAATGGGTTTAGTACTTCAAATAATAACAATTACAGTTCCATCTTTGGTTCTTCTTCTACTTCAACTACTCCTGTTATGGCTTCTCTACTTAGCTCTACACTACTGCAACAGAAGTTCATGAGTACTGGTGGTGGAATAAAAGGTGGTGGTGGTGGTGGTGGTGGTGATGATGATCCTTTTCATCATCATCAAGAGATGGATTCAAAAGAAGTGAAATTAGGTGAAGGGCTACAAAATAGGTTGGATCAGTGGAATATGAATAATCTGAATGGTAATGGTGGTGCTGTTTTTCAAAACCAGATGGAGAATATGGGTTTGTCTGAAAATAATGCTTCTCTTTATTGGAATAATAATCACAACAACAGCAACAACAACACAGCAGCAACAGCAACAGGTTTGGGTAGTGTTTGGAGTACTGATCAACCTGGTTCTAATTCAGTTTCTTCTCTGATCTAG 1197 0.3801 MFGNGNCDVDNEKTIITSSKWTQSEIDDHKVSMASSTGNRVMEKPGQELLQQQQQALRCPRCDSSNTKFCYYNNYSLTQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKRPTYSCSNNNNIDSSASPSSSTPSSVVANPNPPSQSQQQQQQQQQHHSFDIAATSNHINTMLYGNNSCHDVMNFPFSTRFNSTTRVSNPASGYDNLHQNGLGLGFSSGILMSAAGGEVNLNHHHHHHHDEGSYRNGFSTSNNNNYSSIFGSSSTSTTPVMASLLSSTLLQQKFMSTGGGIKGGGGGGGGDDDPFHHHQEMDSKEVKLGEGLQNRLDQWNMNNLNGNGGAVFQNQMENMGLSENNASLYWNNNHNNSNNNTAATATGLGSVWSTDQPGSNSVSSLI* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2651 398 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 296 IPR045174 GO:0003700|GO:0006355
Psa7g2651 398 Pfam Dof domain, zinc finger 55 111 IPR003851 GO:0003677|GO:0006355
Psa7g2651 398 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 12 296 - -
Psa7g2651 398 MobiDBLite consensus disorder prediction 117 161 - -
Psa7g2651 398 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Psa7g2651 398 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2651 Psa-Chr7 189256455 189259537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2651 28 115 C2C2-Dof Transcription Factor Family AT5G65590 63.636 1.18e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Psa7g2651 zf-Dof 6.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2651 - - cam:101512658 387.882