Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2576 ATGGGTTTGAGTTCCAAACAAGTGATTTCCAGCAGTGGACTTGATTGGAAACAAACCTTATTAGAATCTCAAGATTTGGAACTTCCAAAGCCTCATCATCTAATGAGAAAACAGCAACAAAATCCTCAGCAGCAACAATCAGCAGAACATTTGAAGTGTCCAAGATGTGACTCAACAAACACCAAGTTTTGTTACTATAACAATTACAACAAGTCTCAGCCTCGCCATTTTTGTAGAGCTTGTAAAAGACACTGGACTAAAGGTGGAACCCTACGCAATGTTCCTGTTGGTGGTGGCAGAAAGAACAAGAGGATCAAAAAACCAACCACACCAGTTACTTCTTCCACCACTACTGCCACCACCTCAATTCAAACGCCTCTTCAAAATATGATGATGATGAACACCAGAGACTTATTAGTAGAAAGCAAAGATTTTGGCATGTTTAGTACTACTTGTTCAACTTTACCTATTCCTCCTCATCAAAATCAAAGCTTGCTCTTTCCCTTTTCAACCTCCTCAAGCTCTTTTGACACAACCACTTGTTCGTCTTCCAATGTTTATTACTATGGACAAGAGTTTAAAACAATGGAGGAACAGGAACAGGAACAGGAAGCTATAATTCCTAACACAAAGCCATGGGAGATACCGATGGCGATACCGACATCATTACCATTACCAGCAACAAGTGGTGGCATGGAAGCTTCAAAGTATTGGAATTGGGAAGACATTGATTCATTGGTATCAGCTGATTTAAAGGATCCTTATTGGGATGATTCTGATATCAAACCATGA 792 0.3977 MGLSSKQVISSSGLDWKQTLLESQDLELPKPHHLMRKQQQNPQQQQSAEHLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRIKKPTTPVTSSTTTATTSIQTPLQNMMMMNTRDLLVESKDFGMFSTTCSTLPIPPHQNQSLLFPFSTSSSSFDTTTCSSSNVYYYGQEFKTMEEQEQEQEAIIPNTKPWEIPMAIPTSLPLPATSGGMEASKYWNWEDIDSLVSADLKDPYWDDSDIKP* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2576 263 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Psa7g2576 263 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Psa7g2576 263 MobiDBLite consensus disorder prediction 100 120 - -
Psa7g2576 263 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 184 IPR045174 GO:0003700|GO:0006355
Psa7g2576 263 PANTHER OS06G0284500 PROTEIN 37 184 - -
Psa7g2576 263 Pfam Dof domain, zinc finger 50 103 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2576 Psa-Chr7 184706047 184706919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2576 51 108 C2C2-Dof Transcription Factor Family AT1G28310 83.051 3.03e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Psa7g2576 zf-Dof 8.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2576 - - mtr:MTR_4g089095 343.199