Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2030 ATGCATTTGTTTCAGATTCCTCTTTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCCTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATCCAATTTGTGATTGGAAAACGCTTCTACATAGCAGCTATCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGGACTACAGCATCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACCAGTGCTATGCTTATAACATTTGTATTGTTGGGCAAGTATTTGGAATGTCTCGCTAAGGGAAAGACATCTGATGCCATTAAGAAGTTAGTAGAACTCACTCCTCCAACAGCTTTATTGGTTGTTAAAGACAAAGATGGTAGATCTATTGAAGAAAGAGAAATAGATTCCTTGCTCATCCAACCTAGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCTGCTGATGGAATTGTTACCTGGGGCTCAAGTTATGTGAATGAGAGTATGGTGACTGGGGAATCTCTACCTGTTTTGAAGGAAATCAATGCATCTGTTATTGGAGGTACAATAAATTTTCACGGTGTCCTTCACATTCATGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAATTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAGCAAGTATATTTGTTCCTACAATTGTAGCTCTATCAATATTGACACTATTGTGTTGGTATACTGCCGGGGCTCTTGGAGCTTACCCAGATGAATGGCTGCCGGAAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCAACACCAACTGCTGTCATGGTGGCCACAGGAGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGATTCCTTAGAAAGAGCTCAGATGGTGAAATATGTTATATTTGATAAAACAGGAACTCTAACTCAGGGGAAAGCCAATGTATCTGTTGCCAAGGTGTTTGCAGGAATGGATCGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCGCTGGCAAAAGCAATATTACAATATGCACGCCATTTTCACTTCTTTGACGAGTCCTCTCTTACCAATGGTTCCCAGAATGATGCCAATGAATTAAAACCAGGGTGGCTTTATGATGCCTCAGATTTCTCTGCTATTCCAGGAAAGGGTGTGCAGTGCATTATAGATGGACAGCGTGTTTTGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGTATAAACATTTCTACTGAAGTGGAAAGTTTTGTTGTAGAGCTTGAAGAAAGTGCTAAGACAGGGATCCTTGTAGCATGTGACGGTATATTGATTGGAGTTTTGGGGGTTGCAGACTCACTTAAACGAGAAGCTTCTGTTGTTATAGAGGGTCTCAAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACAGCTCGAGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTTAGAGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTTGTTCGTTCATTCCAAAAAGATGGAAGTATAGTTGCAATGGTGGGCGATGGTATAAATGACTCTCCTGCATTAGCTGCTGCAGATGTTGGCATGGCAATTGGGGCTGGGACAGATATTGCCATAGAAGCTGCTAACTATGTTTTGATGAGAGATAATTTGGAAGACGTGATCACAGCAATTGATCTATCTAAAAAGACCTTTTCTCGTATTCGATTGAATTATGTATTCGCGATGGCCTACAATATTATAGCCGTACCAGTTGCTGCTGGTGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCGTCTGTGAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCCAGACTTACTACAATACTTGAAATAGTTGTAAATTAA 2106 0.4131 MHLFQIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFVIGKRFYIAAIRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPPTALLVVKDKDGRSIEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESLPVLKEINASVIGGTINFHGVLHIHATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVASIFVPTIVALSILTLLCWYTAGALGAYPDEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDSLERAQMVKYVIFDKTGTLTQGKANVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKPGWLYDASDFSAIPGKGVQCIIDGQRVLVGNRKLLVESGINISTEVESFVVELEESAKTGILVACDGILIGVLGVADSLKREASVVIEGLKKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIVVN* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2030 701 Pfam haloacid dehalogenase-like hydrolase 351 589 - -
Psa7g2030 701 Gene3D - 362 454 IPR023299 GO:0000166
Psa7g2030 701 Gene3D - 455 506 IPR023299 GO:0000166
Psa7g2030 701 SUPERFAMILY HAD-like 354 681 IPR036412 -
Psa7g2030 701 SFLD p-type atpase 337 626 IPR044492 -
Psa7g2030 701 SUPERFAMILY Calcium ATPase, transduction domain A 155 241 IPR008250 -
Psa7g2030 701 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 439 658 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2030 701 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 108 375 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2030 701 PANTHER ATP7, ISOFORM B 3 694 - -
Psa7g2030 701 Gene3D - 322 632 IPR023214 -
Psa7g2030 701 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 684 IPR027256 GO:0006812|GO:0016021|GO:0019829
Psa7g2030 701 PRINTS P-type cation-transporting ATPase superfamily signature 191 205 - -
Psa7g2030 701 PRINTS P-type cation-transporting ATPase superfamily signature 355 369 - -
Psa7g2030 701 PRINTS P-type cation-transporting ATPase superfamily signature 500 511 - -
Psa7g2030 701 PRINTS P-type cation-transporting ATPase superfamily signature 522 532 - -
Psa7g2030 701 PRINTS P-type cation-transporting ATPase superfamily signature 575 594 - -
Psa7g2030 701 PRINTS P-type cation-transporting ATPase superfamily signature 598 610 - -
Psa7g2030 701 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 664 IPR023298 -
Psa7g2030 701 ProSitePatterns E1-E2 ATPases phosphorylation site. 357 363 IPR018303 -
Psa7g2030 701 Gene3D - 123 245 - -
Psa7g2030 701 PANTHER HEAVY METAL P-TYPE ATPASE 3 694 - -
Psa7g2030 701 CDD P-type_ATPase_Cu-like 3 671 - -
Psa7g2030 701 PRINTS H+-transporting ATPase (proton pump) signature 547 563 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2030 701 PRINTS H+-transporting ATPase (proton pump) signature 575 591 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2030 701 PRINTS H+-transporting ATPase (proton pump) signature 606 631 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g2030 701 SFLD C1.7: P-type atpase like 337 626 - -
Psa7g2030 701 Pfam E1-E2 ATPase 136 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2030 Psa-Chr7 148299009 148305692 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2030 7 148299009 148305692 Psa7g2030 7 148299009 148305692 ECH