Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2000 ATGCCTGTGGCGAGACGAGAGACTTGTGATGGAAGAGTCATTGCTCACGTAGACATGGATTGCTTTTACGTCCAAGTGGAACAGAGGAAGCAGCCATGTTTAAGGGGCTTGCCTACTGCAGTCGTACAGTACAACTCCTACAAAGGCGGAGGCTTGATCGCTGTTAGCTATGAAGCTCGCAAATGTGGAGTCAAACGTTCAATGCGTGGCGATGAAGCAAAGGAAGCCTGTCCGGAAATTCAATTGGTTCAAGTCCCGGTAGCACGCGGTAAAGCTAATCTCAACACATATAGGAATGCTGGTTCTGAGGTTGTTACAATTCTTTCGCGGAAGGGTCGATGTGAGAGAGCTTCAATTGATGAGGTGTATCTTGACCTCACTGATGCTGCTCAAACTATGTTAATGGAAACTCCTCCGGAAAGTATGGAGCATGTTGAGGAGGAAGTTATCAAGTCACATGTTTTGGGGCTTCAAGTTAAGGATGGAGTTGATGCTAAAGAAGAAGTTAGAAAGTGGCTTTGTAGGAGCGATGCTAGCTATCAAGAAAAGCTATTAGCTTGTGGGGCCTTCATTGTTGCTGACCTCAGAATGCAGGTTTTGAAAGAGACGGAGTTCACATGCTCTGCTGGTATTGCTCATAATAAGATGCTGGCTAAACTTGCTAGTGCTATGAACAAACCTGCACAACAAACAGTTGTTCCACATTCATCTGTTGAAGGGTTGCTCGAGTCTTTTCCCATTAAGAAAATGAAACAGCTTGGGGGAAAGCTGGGGACTTCCTTACAAAGTGACCTTGGTATCAACACTGTTGGTGATCTGCTTCAATTTTCAGAGGAGAAGCTACAGCAACATTATGGGATCAATACTGGTACTTGGCTGTGGAATATTGCGAGAGGAATCAGCGGGGAAGAAGTTGAGGAGCGACTACTTCCCAAGAGCCATGGTTCTGGAAAGACATTTCCTGGGCCTCAAGCTTTGAAGACATTTGCATCTGTTCAGCACTGGCTTAACGAACTGAGTGAAGAGCTGAGTGAACGCCTTGACTCTGACATGGATCAAAACAAACGGATTGCGCACACCTTGACTCTGCATGCTAGAGCATATAAGAGAGGGGATTTAGATTCACATAAAAAGTTCCCTTCTAAATCTTGTCCTTTAAGATATGGGACTACAAAGATCCAAGAGGATGCCCTAACTCTATTTCACGCTGGATTACGTGATTTTTTGGGCATTTTCAACTCTAAGACTCACAGCAGTGAAAATAACAACTGGGGAATAACAGCACTTTCTGTTTCTGCGAGTAAGATTGTCCCCATACCATCTGGGACACATTCGATTGCTAAATATTTCGTTGAGCGATTACCATCTGGTTCTTCATCAAATCAACCTGTAGATAATGTTATTGACGAAGTTGCACCATCCTCACCGTCAGGTGAAAATTGTTGGGAAGTGATTCCTAATGAAATGCAAGTTGAATATCTTGAAGAAGACCCAGGAATGAACCATTCAAATGCTTGTCTAGATCAACCGGATCTGTTGGGCAATTTATCGGAAAATGTAGATGGCTTGACTGAAGAATCCTCCCTTGTGGCACCCCCGGGAAATGAAGACAGGGTGACACAAATTGAGTCATGTAGAGATATACCCGCAAAAGAACCTAGGCATGCTTCCGATGCCTACAGTTTGAAAGCAGTAGAGAAGAAAAAGGCAGCAGGAAAGAAGCCTCAAGGGAATTGTTCAATTACAAAATTCTTCAATAATTACCATAGTTCCCAGTCTTCATTTGAGCAGAAGAATGTTGCAAATGCTCAAGGATCTCCGTCTGCCAGTTCTAGTTATTTAGCAAATAATCAAGTTGAGATGCTACCTGAAGAGGTTGATAAAAATAGCATAGGTTGTATACCTCAAAGAAGCCAAACTTGGAGTTATAACATTGATGAGATTGACCCCTCTATCATTGATGAATTACCACCCGAAATTCAGGATGAGTTTCGAACATGGCTTAGGCCTCGTAAGCGACCTCATGTGGTTAAACGAGGTTCTAATATTACTCAATATTTCCGGCCTGACAAGTAG 2076 0.4326 MPVARRETCDGRVIAHVDMDCFYVQVEQRKQPCLRGLPTAVVQYNSYKGGGLIAVSYEARKCGVKRSMRGDEAKEACPEIQLVQVPVARGKANLNTYRNAGSEVVTILSRKGRCERASIDEVYLDLTDAAQTMLMETPPESMEHVEEEVIKSHVLGLQVKDGVDAKEEVRKWLCRSDASYQEKLLACGAFIVADLRMQVLKETEFTCSAGIAHNKMLAKLASAMNKPAQQTVVPHSSVEGLLESFPIKKMKQLGGKLGTSLQSDLGINTVGDLLQFSEEKLQQHYGINTGTWLWNIARGISGEEVEERLLPKSHGSGKTFPGPQALKTFASVQHWLNELSEELSERLDSDMDQNKRIAHTLTLHARAYKRGDLDSHKKFPSKSCPLRYGTTKIQEDALTLFHAGLRDFLGIFNSKTHSSENNNWGITALSVSASKIVPIPSGTHSIAKYFVERLPSGSSSNQPVDNVIDEVAPSSPSGENCWEVIPNEMQVEYLEEDPGMNHSNACLDQPDLLGNLSENVDGLTEESSLVAPPGNEDRVTQIESCRDIPAKEPRHASDAYSLKAVEKKKAAGKKPQGNCSITKFFNNYHSSQSSFEQKNVANAQGSPSASSSYLANNQVEMLPEEVDKNSIGCIPQRSQTWSYNIDEIDPSIIDELPPEIQDEFRTWLRPRKRPHVVKRGSNITQYFRPDK* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2000 691 Pfam impB/mucB/samB family 17 222 IPR001126 GO:0006281
Psa7g2000 691 PIRSF DNA_pol_eta 6 686 - -
Psa7g2000 691 Gene3D - 247 303 - -
Psa7g2000 691 Gene3D - 305 437 IPR036775 GO:0003684|GO:0006281
Psa7g2000 691 Gene3D - 21 88 - -
Psa7g2000 691 ProSiteProfiles UmuC domain profile. 14 254 IPR001126 GO:0006281
Psa7g2000 691 PANTHER DNA POLYMERASE ETA 6 675 - -
Psa7g2000 691 Gene3D - 89 233 IPR043128 -
Psa7g2000 691 PANTHER DNA POLYMERASE ETA 6 675 - -
Psa7g2000 691 SUPERFAMILY DNA/RNA polymerases 10 305 IPR043502 -
Psa7g2000 691 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 310 438 IPR036775 GO:0003684|GO:0006281
Psa7g2000 691 Pfam impB/mucB/samB family C-terminal domain 311 439 IPR017961 GO:0003684|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2000 Psa-Chr7 145734069 145739868 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2000 7 145734069 145739868 Psa7g2000 7 145734069 145739868 ECH