Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1905 ATGAGCAGCAGCCACCACCGCCGTATGGACAAATCCCATACCTTTCTTCACAGTTTTCTCAAACACTTCAAATTCGGTTCCACTGCAGACCAAAACGATGAAGCTGAGATACAAAGAATGGCTTCACGAGAACAGAAGATATTTTCATATGAAACCCTTGTTTCTGCCACCAAGAATTTTGATTCTAAATTAGGTGAAGGAGGTTTTGGACCTGTCTACAAGGGGAAATTGAGTGATGGTAGAGAAATTGCGGTGAAGAAATTATCACAGACATCAAATCAAGGGAAGAAGGAGTTCATGAATGAGGCAAAGTTGTTAGCTCGTGTGCAGCATAGGAATGTGGTGGATTTGTTGGGTTATTGTGTTCATGGCACAGAGAAGCTACTTGTTTATGAGTATCTTCCCCATGAGAGCCTTGACAAGTTTCTATTCAAACCTGATAAGAGAGAGCAGCTTGATTGGAAACGTAGGTTTGGAATAATCACTGGCGTGGCGAAGGGGTTACTCTATCTCCACGAAGATGCGCACCAGTGCATAATCCATCGTGACATTAAGGCAAGTAACGTATTGCTTGCTGACAAATGGGTGCCCAAGATTGCAGATTTCGGTATGGCGCGTCTCTTCCCTGAAGATCAAAGCCAAGTCAATACACGTGTCGCCGGAACAAATGGATATATGGCGCCAGAATATATGATGCACGGAAGACTCTCTGTCAAGGCCGACGTGTTTAGCTATGGAGTTTTGGTACTAGAGTTGATCACTGGCCAAAGAAACTCTTCCTTTAATTTGGATGTGGAGGAGCATAACCTCTTCGATTGGGCATACAAGATGTACAAGAAAGGAAAGTGCTTAGAAATTGTAGATACTACATTAGTATCTACGGCTATAACAGAACAAGTAGCTATGTGTATTCAACTAGGTCTTCTATGCATCCAAGGAGATCCACAACTTCGTCCAACAATGAGACGCGTGGTGGTGATTCTTTCGAGGAAACCACCGCATAACCACATGGAAGAACCAACAAGACCAGGAATACCGGGTAGCAGATATAGAAGACCTCCTGGACACTCTGGTTTGTCTTCCACAATTGGCAGTACCTCTGGTGGTGTTTCTTATTCTCAGTCTTCGGATTCGAGTAAGAACGGTACGACTCTTTCTAGAACTGTCACTGGTACAAGTTCAGGTACTGCTGAGTTAGATCCAAGAGGGAAACGTCCAATGAAGGATTAG 1230 0.4374 MSSSHHRRMDKSHTFLHSFLKHFKFGSTADQNDEAEIQRMASREQKIFSYETLVSATKNFDSKLGEGGFGPVYKGKLSDGREIAVKKLSQTSNQGKKEFMNEAKLLARVQHRNVVDLLGYCVHGTEKLLVYEYLPHESLDKFLFKPDKREQLDWKRRFGIITGVAKGLLYLHEDAHQCIIHRDIKASNVLLADKWVPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYMMHGRLSVKADVFSYGVLVLELITGQRNSSFNLDVEEHNLFDWAYKMYKKGKCLEIVDTTLVSTAITEQVAMCIQLGLLCIQGDPQLRPTMRRVVVILSRKPPHNHMEEPTRPGIPGSRYRRPPGHSGLSSTIGSTSGGVSYSQSSDSSKNGTTLSRTVTGTSSGTAELDPRGKRPMKD* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1905 409 MobiDBLite consensus disorder prediction 328 409 - -
Psa7g1905 409 ProSiteProfiles Protein kinase domain profile. 58 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1905 409 SUPERFAMILY Protein kinase-like (PK-like) 45 329 IPR011009 -
Psa7g1905 409 CDD STKc_IRAK 64 330 - -
Psa7g1905 409 Pfam Protein tyrosine and serine/threonine kinase 60 326 IPR001245 GO:0004672|GO:0006468
Psa7g1905 409 Gene3D Transferase(Phosphotransferase) domain 1 134 341 - -
Psa7g1905 409 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 383 - -
Psa7g1905 409 SMART serkin_6 58 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1905 409 PANTHER RECEPTOR-LIKE KINASE 11 383 - -
Psa7g1905 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Psa7g1905 409 MobiDBLite consensus disorder prediction 358 397 - -
Psa7g1905 409 Gene3D Phosphorylase Kinase; domain 1 22 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1905 Psa-Chr7 139860884 139864510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1905 48 345 Receptor kinase-like Gene Family AT4G11530 52.318 2.27e-106 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g1905 PK_Tyr_Ser-Thr 1.2e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1905 7 139860884 139864510 Psa7g1905 7 139860884 139864510 ECH