Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1896 ATGGGTACGCTTCAGTCATGGCGAAGAGCTTACGGCGCCATCAAAGACACTACCAAAGTTGGTCTCGCCCATGTCAATAGCGATTACGCGGATTTGGATGTTGCTATAGTCAAAGCCACTAATCACGTAGAGGTTCCACCCAAAGAGAGACACCTAAGAAAAATTCTGTTTGCAACTTCTGCTGTTCGACCTAGGGCGGATGTTGCTTATTGCATTCACGCACTTTCACGACGCCTTGCCAAGACCAGAAATTGGACGGTGGCATTAAAAACACTGATAGTCATCCATAGGTTACTAAGGGAGGGAGATCCAACTCTTAGAGAGGAAATTGTGAATTTCTCACAGAGAGGACGGATTCTCCAACTTTCAAATTTTAAGGATGATTCTAGTCCAATTGCCTGGGATTGTTCTGCCTGGGTACGTACCTATGCATTATTTTTGGAAGAAAGACTTGAATGCTTTCGAATTCTTAAGTATGATATTGAAGCTGAGCGTCTACCCAAAGCTTCCCAAGGACAGGAGAAGGGACACAGCAAGACCAGGGATTTAGATAGTGAGGAGCTATTGGAGCAGTTGCCTGCTTTGCAACAGCTGCTATATCGACTTGTTGGCTGTCGGCCAGAAGGAGCAGCTGTTAGCAATTATGTGATACAATATGCTCTGGCTCTGGTACTGAAAGAGAGCTTTAAGATTTATTGTGCTATTAATGATGGCATTATCAATCTTGTTGACAAGTTTTTTGAGATGCCAAGACATGAAGCTATTAAAGCCCTTGAAGCCTATAAACGTGCGGGACAACAGGCAGCAAGCCTTTCTGATTTCTATGAGGTTTGCAAAGGATTGGAACTCGCTAGAAATTTTCAGTTTCCTGTCTTAAGAGAGCCCCCGCAATCTTTTCTTACAACTATGGAAGAGTACATTAGGGAGGCACCCCGAGTGGTTTCAGTTCCAAATGAGCCCATGCTTCAGTTGACTTACAGACCAGACGAAGTTCTTGCAATTGAATACACCAAAGAGTCTGAAGAACAGATGCCATCAGAACCTGAACCTATTGATAATAATGTTGTTGTCCCCAATTCTGAGGCTGCTCCTCCTCCCCCACCACCATCTCACAACAATTTTGACACTGGAGACTTACTGGGATTGAATGACCCGGAACCTAATGCATCATCCATAGAGGAAAGAAACGCCCTTGCGCTGGCCATAGTCTCCACTGAAAATGGAACTGCATCAGCTTTTAACTCTAGTGCTGCTCAAACAAAAAATTTCGACCCTACTGGATGGGAGCTTGCCCTGGTTAGCACTCCAAGTACAGATATTTCTTCAGTCAACGAGAGACAATTGGCTGGTGGACTGGACTCTCTCACTCTTAACAGCTTATATGATGAAGGTGCGTATAGAGCTGCGCAGCAACCAGTTTATGGAGCACCAGCTCCAAATCCATTTGAAGTTCATGATCCGTTTGCTGTATCAAGCAGTGTCGCCCCCCCAACCGCTGTCCAAATGGCAGCAATGCAACAGCAAGCAAATCCATTTGGTCCCTATCAACAGTTTCCGCCTCAGCAGCAGCAGCAGCATATGTTAATGGACCCAGCAAATCCCTTTGCTGATTCAGGATTTGGGGCTTTTCATGCAAATCCCGTTTCTCACCCCCAGAATAACAATCCATTTGGAAGCACAGGCTTGTTGTAA 1692 0.4515 MGTLQSWRRAYGAIKDTTKVGLAHVNSDYADLDVAIVKATNHVEVPPKERHLRKILFATSAVRPRADVAYCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTLREEIVNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPKASQGQEKGHSKTRDLDSEELLEQLPALQQLLYRLVGCRPEGAAVSNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEAYKRAGQQAASLSDFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYIREAPRVVSVPNEPMLQLTYRPDEVLAIEYTKESEEQMPSEPEPIDNNVVVPNSEAAPPPPPPSHNNFDTGDLLGLNDPEPNASSIEERNALALAIVSTENGTASAFNSSAAQTKNFDPTGWELALVSTPSTDISSVNERQLAGGLDSLTLNSLYDEGAYRAAQQPVYGAPAPNPFEVHDPFAVSSSVAPPTAVQMAAMQQQANPFGPYQQFPPQQQQQHMLMDPANPFADSGFGAFHANPVSHPQNNNPFGSTGLL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1896 563 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Psa7g1896 563 Gene3D - 7 161 IPR008942 -
Psa7g1896 563 PANTHER OS05G0549000 PROTEIN 1 546 - -
Psa7g1896 563 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Psa7g1896 563 Gene3D ANTH domain 172 321 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Psa7g1896 563 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 546 IPR045192 GO:0048268|GO:0072583
Psa7g1896 563 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Psa7g1896 563 CDD ANTH_N 32 154 - -
Psa7g1896 563 SUPERFAMILY GAT-like domain 178 309 - -
Psa7g1896 563 SMART enth_2 30 161 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1896 Psa-Chr7 138834257 138842242 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1896 7 138834257 138842242 Psa7g1896 7 138834257 138842242 ECH