Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1885 ATGAAGAGAGAGCATAACCAAGAACACGAAGATGCGAGTATGACTGGTAAATCGGAGATTTGTTGGGAAGACGACGGTGGTATGGATGAGCTTTTAGCGGTGGTTGGTTACAAGGTGAAATCATCAGACATGGCTGAAGTTGCTCAAAAGCTTGAACAACTTGAACAAGCTATGGGTAATTTTCAAGATCAAGATGAAGCCACCATCGCTCAACACCTCTCAAACGACACCGTTCATTACAATCCTGCTGATATTTCTAACTGGCTTCAAACTATGCTTTCCAATTTTGACTCTCAACCTAATCCCTCTGTTTCCTCTTCCTCCGATAACGACCTTAACGCCATTCCCGGTAAAGCTATCTACGCCAACACTGATTCACAGACAGAGGAGTCTCTTCCCTCTCGGAAACGAGTCAAACGAGTAGGTTCTTCTTCTTCCACCGAGTCAACTCGTCCCGTTGTTATGGTTGTTGAAACGCAGGAGAAAGGGATTATTCTTGTTCATACTTTAATGGCTTGCGCTGAAGCTGTTGAACAGAATAATCGACCTGTGGCGGAAGCTCTTGTGAAACAGATCGGAAACCTAGCGGTGTCGCAAGAAGGTGCTATGAGAAAAGTGGCTACCTATTTCGCAATAGGTTTGGCACGAAGAATCTACGATGTGTTTCCACAGCATTCTGTCTCCGATTCGCTTCAGATCCATTTCTATGAAACTTGTCCTTACCTGAAGTTCGCTCACTTCACTGCGAATCAAGCTATTCTTGAAGCTTTTCAAGGAAAATCGCGTGTTCATGTTATTGATTTTTCTATCAATCAAGGGATGCAGTGGCCGGCGCTTATGCAGGCACTTGCCTTGCGTCCTGGCGGTCCTCCTGCTTTTCGTCTCACCGGAATCGGTCCTCCGGCGTCGGATAACTCCGACCATCTCCAACAGGTTGGTTGGAGGCTTGCTCAGTTTGCGCAGACGATTCATGTTCAGTTTGAGTACCGTGGTTTTGTTGCTAACAGTCTTGCTGATCTTGATGCTTCCATGCTTGAACTCCGGTCACCGGAGACTGAGTCCGTCGCAGTTAACTCTGTTTTCGAGCTTCATAAACTCAACGCGCGCCCTGGTGCGCTTGAGAAGGTGTTTTCTGTTATCCGTCAGATTCGGCCGGAGATTGTCACCGTCGTGGAGCAAGAAGCAAATCACAACGGACCGGCTTTTCTCGACCGGTTTACTGAGTCGCTTCACTATTACTCGACGCTGTTTGACTCGCTGGAGAGTTCATTGGTTGAACCGCAGGATAAGGCTATGTCAGAGGTTTACCTCGGGAAGCAAATCTGCAACGTGGTGGCGTGTGAAGGAACGGACCGAGTCGAGCGTCACGAAACACTGAACCAGTGGAGGAACCGGTTCGGTTCAGCTGGGTTTTCTCCGGTTCATTTGGGATCCAACGCGTTCAAGCAAGCGAGTATGTTGTTGGCACTTTTCGCAGGTGGGGATGGTTACAAGGTGGAAGAGAATGATGGTTGTCTCATGTTAGGATGGCACACCAGGCCATTGATTGCAACCTCTGCTTGGAAACTCGCCGCCAACTCAATGGTGGTTTCACACTGA 1599 0.4816 MKREHNQEHEDASMTGKSEICWEDDGGMDELLAVVGYKVKSSDMAEVAQKLEQLEQAMGNFQDQDEATIAQHLSNDTVHYNPADISNWLQTMLSNFDSQPNPSVSSSSDNDLNAIPGKAIYANTDSQTEESLPSRKRVKRVGSSSSTESTRPVVMVVETQEKGIILVHTLMACAEAVEQNNRPVAEALVKQIGNLAVSQEGAMRKVATYFAIGLARRIYDVFPQHSVSDSLQIHFYETCPYLKFAHFTANQAILEAFQGKSRVHVIDFSINQGMQWPALMQALALRPGGPPAFRLTGIGPPASDNSDHLQQVGWRLAQFAQTIHVQFEYRGFVANSLADLDASMLELRSPETESVAVNSVFELHKLNARPGALEKVFSVIRQIRPEIVTVVEQEANHNGPAFLDRFTESLHYYSTLFDSLESSLVEPQDKAMSEVYLGKQICNVVACEGTDRVERHETLNQWRNRFGSAGFSPVHLGSNAFKQASMLLALFAGGDGYKVEENDGCLMLGWHTRPLIATSAWKLAANSMVVSH* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1885 532 Gene3D - 27 96 IPR038088 -
Psa7g1885 532 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g1885 532 SMART DELLA_2 29 106 - -
Psa7g1885 532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 151 523 IPR005202 -
Psa7g1885 532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 134 IPR005202 -
Psa7g1885 532 Pfam Transcriptional regulator DELLA protein N terminal 29 100 IPR021914 -
Psa7g1885 532 ProSiteProfiles GRAS family profile. 157 522 IPR005202 -
Psa7g1885 532 MobiDBLite consensus disorder prediction 119 150 - -
Psa7g1885 532 Pfam GRAS domain family 166 522 IPR005202 -
Psa7g1885 532 Coils Coil 37 64 - -
Psa7g1885 532 PANTHER DELLA PROTEIN GAI1-RELATED 11 134 IPR030006 GO:0003712|GO:0005634
Psa7g1885 532 PANTHER DELLA PROTEIN GAI1-RELATED 151 523 IPR030006 GO:0003712|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1885 Psa-Chr7 138285873 138289062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1885 23 526 GRAS Transcription Factor Family AT1G14920 68.451 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa7g1885 GRAS 8.5e-136 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1885 7 138285873 138289062 Psa7g1885 7 138285873 138289062 ECH