Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1227 ATGGTGAAAATCACTGAAGAAACCAACCCATCTGAACAAGAAGAAGAAGAAATAGATTATGATGAGCTGAAGAAACGCATGTGGAAGGACAAAATCCTACTACAGAAGCTAAAGGAAAAAGGCAAGAAACAAGAACAAAACCAGCAAGCAAAAGATGAAGCGTCGGGAAGGAAGAAGATGTTAAGAGCACAAGATTCAATCCTCAAATATATGATGAAGATTATGACAATATGCAAAGCTCAAGGTTTTGTCTATGGTATTGTACCAGAAAATGGAAAACCAGTGACAGGTTCTTCAGAAAGCTTGCGTGAGTGGTGGAAAGAACAAGTCAAGTTCAGCCAAAACGCACCAGAAGCAGTTTCGAAATACTTATTATTACCAGCACTTTTTGAAAAGCAACAAGATTCAATTTCATCATACATGCATTTACTTTATGAACTACAAGATACTACTTTAGGTTCACTACTTTCAGCTCTCATGCAACACTGTGTGCCACCACAAAGAAGGTTCCCTCTTGAAAGAGGTTTGGCTCCTCCTTGGTGGCCAAATGGGAAAGAACAGTGGTGGGGTCAACAAGGTGTTTTGGCACAAAGACATGGCCCACCACCTTATAAAAAGCCGCATGATTTGAAAAAGGGTTGGAAAGTTTCTGTCTTGGCTGCAATCATCAAACACTTGTCTCCTGATGTTGATAAAGTTAGAAGGCTTGTGACTCAATCCAAGACTTTGCAAGATAAGATGACAGCTAAAGATAGTGCAACTTGGTGCAAAGTTATGAACCAAGAACAAGCTTTGCTTTCACAGCTCACTAAAAAATGCCTCAAGATATCAGAAGGAGGTGAAAGCTCTAGTAGTGTTGTTACACATGTTTTGAATGAGAAGAGGAAGAGTGAGTTTGATTTCGATGTTGATTTTGAGAAGATGTATTCATGTCAATATGCTGAGTGTCCACAGAGTGAATTGTGTATGGGATTTTCAGACAAAAGTTCAAGGGTGAACCATGAATCACTATGTTCTTACAGAACAGAACAAGGACATGTTCCCTTCCATGATTATCTGTCAGATGATTGGTTGAATATGGATATAGCAGGATCTAGTAATCAGAATCAGGATCATAGTAACCTCGTTGGAAATGTTAATGAAATGAGAGAGATCGTGGATAGGACAGTAGAAGATTGTGGTGAATTTTGGATAAATGGCATACAAGATCTTGAATTGCACATGGGAATGGACATGAGTAGAGATAATGTGGACTTGAATCAAAATCCAAAACAAGGTACCACATTAAGTCATGAAGAAACCTCAATTTGGGACTTGACGTACCAGTAG 1329 0.389 MVKITEETNPSEQEEEEIDYDELKKRMWKDKILLQKLKEKGKKQEQNQQAKDEASGRKKMLRAQDSILKYMMKIMTICKAQGFVYGIVPENGKPVTGSSESLREWWKEQVKFSQNAPEAVSKYLLLPALFEKQQDSISSYMHLLYELQDTTLGSLLSALMQHCVPPQRRFPLERGLAPPWWPNGKEQWWGQQGVLAQRHGPPPYKKPHDLKKGWKVSVLAAIIKHLSPDVDKVRRLVTQSKTLQDKMTAKDSATWCKVMNQEQALLSQLTKKCLKISEGGESSSSVVTHVLNEKRKSEFDFDVDFEKMYSCQYAECPQSELCMGFSDKSSRVNHESLCSYRTEQGHVPFHDYLSDDWLNMDIAGSSNQNQDHSNLVGNVNEMREIVDRTVEDCGEFWINGIQDLELHMGMDMSRDNVDLNQNPKQGTTLSHEETSIWDLTYQ* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1227 442 Coils Coil 33 53 - -
Psa7g1227 442 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g1227 442 MobiDBLite consensus disorder prediction 39 58 - -
Psa7g1227 442 PANTHER ETHYLENE INSENSITIVE PROTEIN 6 442 - -
Psa7g1227 442 Pfam Ethylene insensitive 3 21 262 IPR006957 GO:0005634
Psa7g1227 442 SUPERFAMILY DNA-binding domain of EIN3-like 141 266 IPR023278 GO:0003700|GO:0005634
Psa7g1227 442 Gene3D - 49 125 IPR023278 GO:0003700|GO:0005634
Psa7g1227 442 Gene3D - 133 273 IPR023278 GO:0003700|GO:0005634
Psa7g1227 442 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 6 442 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1227 Psa-Chr7 89927492 89928820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1227 2 439 EIL Transcription Factor Family AT5G10120 48.729 1.85e-133 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Psa7g1227 EIN3 1.7e-111 No_clan