Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5280 ATGGCTACCCACGCCTCATCTTTCTCCAGCCTCCGAGCCTACCTCCTAGCCGTATCTCAGACTCCATCTCGCTTCGCTCGGCGCGGCTTCTCCGTCTCAACCTCGTATGAAGAAATGAGCCGCGTACGAGCCAGGTCCGGCACCAGCATGCGGAAGACTCTCCGCTGGTTTGACCTAGTCGGTTTCGGTATCGGCGGAATGGTCGGCGCCGGAGTGTTTATCACCACCGGTACCGCTACGCATAACTTCGCCGGTCCCGCTGTTGTCCTATCTTTCGCCATTGCCGGTTTCTGCGCTCTTTTATCCGCCTTTTGCTACACTGAGTTCGCCGTTGATATGCCGGTTGCCGGTGGAGCTTTTAGCTACCTCCGCGTCACATTCGGTGAATTCGCGGCGTTTTTAACCGGCGCGAATCTCGTTATGGATTACGTTATGTCCAATGCCGCCGTCGCTAGAGGCTTCACGTCGTATGTCGGAACCACAATCGGTGTCTCTCCCGAGAAATGGAGGATCATAATTCCTTCTTTTCCAAAAGGATTTAACCAAATAGACATGGTTGCTGTGGCAGTTGTTTTACTCATCACAATCGTTATCTGTTACAGTACGAGGGAGAGTTCAGTGGTGAATATGATATTGACAGCTTTGCATATATTGTTCATAGCATTTGTGATAGTGATAGGCTTTTGGAAAGGGAGTTGGAAGAATTTTACACAACCGGCTAATCCGGAGAATCCTTCTGGTTTTTTTCCTCACGGTGCGGCCGGTGTGTTTAACGGTGCGGCCGCGGTTTATTTAAGCTACATTGGTTACGACGCGGTTTCGACAATGGCAGAAGAGGTTAAAGAGCCTGTGAAAGATATTCCAATAGGTGTTTCTGGATCTGTTATTATAGTGACGGTTCTTTATTGTCTTATGGCAGCTTCTATGTGCATGCTTCTTCCTTACGATATGATTAATCCTGAGGCACCATTTTCAGCTGCTTTTAAATCAGACGGTTGGGGATGGGTGTCAAGAGTGATAGGAGTGGGGGCCAGTTTTGGAATATTGACATCATTGATAGTGGCTATGTTGGGTCAGGCTCGCTATATGTGTGTAATAGGTCGTTCTAATATGGTCCCTGCCTGGTTTGCGAAGGTCCACCCAAAAACATCTACTCCTGTCAACGCCTCTGCTTTTCTTGGGATATTCACAGCAGCCATTGCACTTTTCACTGATCTTGATGTACTTCTCAACCTTGTATCAATTGGAACACTCTTTGTTTTCTACATGGTCGCAAACGCCGTTGTTTACCGACGCTACGTCGCTGCAGGGACAACAAATCCATGGCCAACAGTGTCCTTTCTCTTATCATTCTCCTTCACTTCCATTGTGTTCACCCTTATTTGGAAAATCGTACCAACCGGAGTAGCAAAAGCCGCGATGTTAATTGCTTGCGGTGTGTTTGCCGTAGCAATATTAGAGTTTTTCCATTTCACAGTTCCTCAAGCTAGAAAACCGGAATTTTGGGGTGTTCCTCTTATGCCTTGGATACCGGCTATGTCAATATTTTTGAACTTGTTTTTGCTCGGATCACTCGATGGAAAATCGTATATTCGGTTCGGAGTGTTTTCGGCTGTTACGGTGCTGTTCTATGTGTTATACAGTGTTCATGCTAGCTTTGATGCAGAAGGTGATGGTTCTCTTGATCAAAATGTGGAATCAAAAGAAAGAGTGGACCAAAGTTTCAAAGTGTAG 1734 0.4677 MATHASSFSSLRAYLLAVSQTPSRFARRGFSVSTSYEEMSRVRARSGTSMRKTLRWFDLVGFGIGGMVGAGVFITTGTATHNFAGPAVVLSFAIAGFCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFLTGANLVMDYVMSNAAVARGFTSYVGTTIGVSPEKWRIIIPSFPKGFNQIDMVAVAVVLLITIVICYSTRESSVVNMILTALHILFIAFVIVIGFWKGSWKNFTQPANPENPSGFFPHGAAGVFNGAAAVYLSYIGYDAVSTMAEEVKEPVKDIPIGVSGSVIIVTVLYCLMAASMCMLLPYDMINPEAPFSAAFKSDGWGWVSRVIGVGASFGILTSLIVAMLGQARYMCVIGRSNMVPAWFAKVHPKTSTPVNASAFLGIFTAAIALFTDLDVLLNLVSIGTLFVFYMVANAVVYRRYVAAGTTNPWPTVSFLLSFSFTSIVFTLIWKIVPTGVAKAAMLIACGVFAVAILEFFHFTVPQARKPEFWGVPLMPWIPAMSIFLNLFLLGSLDGKSYIRFGVFSAVTVLFYVLYSVHASFDAEGDGSLDQNVESKERVDQSFKV* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5280 577 Pfam C-terminus of AA_permease 502 552 IPR029485 -
Psa6g5280 577 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 3 564 - -
Psa6g5280 577 PIRSF AA_transporter 469 572 - -
Psa6g5280 577 PIRSF AA_transporter 35 500 - -
Psa6g5280 577 Gene3D Amino acid/polyamine transporter I 49 495 - -
Psa6g5280 577 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 3 564 - -
Psa6g5280 577 Pfam Amino acid permease 54 479 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5280 Psa-Chr6 464510032 464514216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5280 141 573 Organic Solute Cotransporters AT3G10600 73.793 0.0 655
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5280 6 464510032 464514216 Psa6g5280 6 464510032 464514216 ECH