Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5255 ATGATGGATTCTCCCACTATCTCGTCTTCTTCCTCTGAGTTTTCTTCCACAGCCACCGCTGATCAGAGTGCAGCCCGGAGTAGGAGAAGTGGCGGCGGCAGTGAAGTGGTGGCCGCGGAACAATCACGGCGGTGGCATGATGTTTTCTGGTTAGGGATTTTTGTGATACATTTGATTGGACTAGGATTTCTTCTTGGGGTTCTTGGCTTCAATAGGTTTGAGATAGAGAATAGACTTGACATTGATAAGTACACCTCGGGTCTTTCGGGGAATGAAGCTGGGTTGACAGAGACTTACTGGCCGCTCTATGGGGTTGCTGGTGGAATTGGGACTGTTCTTGGATGGACTTGGATGTTGTTGTTGGGTTCCCGGGCTACTCAAATGATGAAGGTTTCTGTTCACATCCTGACCACATATCTCGCCGTCATCAGTGTTTTGTGTTTCTGGACCGAGCAGATTTTCTGGGGGGTTGCTTTTGCTATAGGCGCTGCTCTCCAGTTCTTGTATGTTATATCCGTCATAGACAGACTTCCATTTACGATGTTGGTTTTGCAAAAAGCTGTGAAGATGGTTTGGAATCTTCCCGAGGTTATGAGAGTATCATATGCATTTATGTTTGTTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCAGCAGGTGTTGTGGCTTCGAACTTGAGTGACGGGGGACGCTGGTGGCTTCTTGTGATTTTCTCTGTAAGCTTATTTTGGACAGGCGCAGTTCTTTGTAATACCGTGCATGTTATAGTGTCTGGGATGGTGTTTCTTGTTCTTCTCCATGGTGGTAGAGAGGCTGCTTCGATTCCCGCTAACTCGTTAACGAAATCTTTACAGTATGCTTTAACAACATCTTTTGGTAGCATTTGTTATGGCTCGTTATTCACTGCTGCTATTAGGACACTGCGATGGGAGATACGTGGAGTTCGGTCAAAGATTGGCAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCCTTTTTCATCTCGTGGAGACTCTCGTTCGATTTTTTAACAAATACGCCTATGTTCAGATAGCTGTTAACGGTAAAAGCTTTAACCATTCAGCTAGAGATGCGTGGGAGCTATTTCAGTCAACCGGGGTCGAGGCACTTGTGGCGTACGATTGTTCAGGCGCTGTCCTGCTAATGGGCACTGTTTTCGGCGGGTTGATAACCGGAACTTGCTCTGGTGCATGGGCGTGGGTTAAATGGAGTGACCGAGTTATCATGATTGGCTCCACATCTATGCTGATGGGAATGGTTTTGGTTGGATTGGCGATGGTTGTGGTGGAGAGTGCTGTTACGTCGATATATATTTGCTATGCAGAAGACCCTTTATTGATTCAGAGATGGGATGCTGAGTTTTTCAACCAGATGTCGGAGACACTACATCACCGACTTCAATATCGGAGTGCTCGAGCCAGGGAAGTTTTAACTCATTATCGACTCAATGACGATCCTATACGAGAAAACGCGGCTATTTGA 1506 0.4608 MMDSPTISSSSSEFSSTATADQSAARSRRSGGGSEVVAAEQSRRWHDVFWLGIFVIHLIGLGFLLGVLGFNRFEIENRLDIDKYTSGLSGNEAGLTETYWPLYGVAGGIGTVLGWTWMLLLGSRATQMMKVSVHILTTYLAVISVLCFWTEQIFWGVAFAIGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFVVLLWMALWSFGAAGVVASNLSDGGRWWLLVIFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAASIPANSLTKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGVRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVNGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLITGTCSGAWAWVKWSDRVIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHHRLQYRSARAREVLTHYRLNDDPIRENAAI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5255 501 MobiDBLite consensus disorder prediction 1 32 - -
Psa6g5255 501 Pfam Plasma-membrane choline transporter 158 452 IPR007603 GO:0022857|GO:0055085
Psa6g5255 501 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 25 494 - -
Psa6g5255 501 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 25 494 IPR007603 GO:0022857|GO:0055085
Psa6g5255 501 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5255 Psa-Chr6 462185279 462187707 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5255 6 462185279 462187707 Psa6g5255 6 462185279 462187707 ECH