Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5250 ATGCACTCCACTCCATCATCATCACCATCCTACAGAATGGCGCCGGCACCTGGTTCATTCCGCCGCAGTTTCCTTGAAAGAGGCAAAGAAAGACTCCTCGCTAAGAAGGAATATCCCGGCGGCGATTTCTCCTTCCACGATCCCCTCCCGCAACCCTTTTACAAACGTGCTTTCAATCTCGACGCACTTTCTCAACGGTTTGTCAACATTCGCAATGGCTCAGTCGAGTTCATCCGTAAACTCCACCATATGGGTCGCAGCGATCCACGCAAAGTCATCTTCGCTATGAAAGCCGGATTATCTTTGGCTATTGTTTCACTTTTCATTTACATTAAAGAACAACAAGTTAACAAGTACTCTATTTGGGCTATTCTCACTGTTGTCGTTGTTTTTGAATTCAGCATAGGTGCTACTCTTAACAAAGGTTTCAATCGTGGTTTGGGAACCATTTCAGCTGGAGTGCTTGCTTTAGGGATTGCACGATTATCCGTTTGGATTGGTGGTGCTTTTGATGAACTTATTATTATAGTAGCTATTTTTATTGCAGGATTTTGTGCAACTTATGTGAAGTTGTATCCTGCAATGAAGCCTTATGAATACGGTTTTCGTGTATTTTTGTTAACCTTTTGTATTGTGTTGGTGTCTGGGAGACATGGAATGCAGTTTTTCACCACTGCTTTTTATAGATTGGTTCTTATTGGTGTTGGTGCTGGTGTGAGTTTGTCTGTGAATATTTGTATTTATCCCATTTGGTCCGGGGAGGATCTCCACAAACTGGTTGTGAAAAATTTCCATGGAGTTGCAATGTCTTTAGAAGGTTGTGTAAATGGATATCTACAATGTGTTGAATATGAGAGAGTTCCATCTAAAATTCTTGTATATCAAGCTTCTGACGACCCTCTTTATCGCGGTTATAGAACAGCAGTGCAATCTTCAAGCCAAGAAGAGACTTTGGTAGATTTTGCATTATGGGAGCCTCCTCATGGTCCATACAAGATGTTCAATTATCCTTGGAGAAGCTATGTCAAAGTTAGTGGAGCATTGAGGCATTGCGCTTTTATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCACCTCCAGAAAAGAGGTTGGTATTCTTCCAAGAGCTTCAGAAGGTAGGCAATGAAGGAGCTAAAATATTGCGCCATCTAGGAAGCAAAGTCGAAAAGATGGAAAAACTAAGCACAAGGGACATTCTGATAGAAGTCCACGAGGCCGCCGAGCTATTACAGATGAAGATTGACAGTCATTCATTCCTCCTAATCAATTCAGAGAATTGGGAAGCTGTCAGACAGCACCAGTCCAAAGAAAATGAACGGTCCAGCAACTTGACTAATGAGAATAATAAGCAGTCAGTGATCAACGAGTCGGGGGACGATTCGCAGCTTAATATAAGCATACAGCAATCGATGTCGGAATTGAGTTTCGCGCAGCAGACGAGCAAGAGCTTAGTATCATGGCCTCATCTCTCTTTTTGCAATGATGCCATAGTGAATGAAGCAGAATCTAAAGTGTATGAAAGTGCTAGCTCATTGTCTTTGGCAACATTTGCTTCACTTTTGATAGAGTTTGTTGCAAGACTTCAAAATCTTGTGGATGAGTTTCAAGATCTTAGTGAGAAAGCTAATTTTAAAGACCCTTTTGATCAACCTATTTTGAAGTGA 1695 0.4159 MHSTPSSSPSYRMAPAPGSFRRSFLERGKERLLAKKEYPGGDFSFHDPLPQPFYKRAFNLDALSQRFVNIRNGSVEFIRKLHHMGRSDPRKVIFAMKAGLSLAIVSLFIYIKEQQVNKYSIWAILTVVVVFEFSIGATLNKGFNRGLGTISAGVLALGIARLSVWIGGAFDELIIIVAIFIAGFCATYVKLYPAMKPYEYGFRVFLLTFCIVLVSGRHGMQFFTTAFYRLVLIGVGAGVSLSVNICIYPIWSGEDLHKLVVKNFHGVAMSLEGCVNGYLQCVEYERVPSKILVYQASDDPLYRGYRTAVQSSSQEETLVDFALWEPPHGPYKMFNYPWRSYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRLVFFQELQKVGNEGAKILRHLGSKVEKMEKLSTRDILIEVHEAAELLQMKIDSHSFLLINSENWEAVRQHQSKENERSSNLTNENNKQSVINESGDDSQLNISIQQSMSELSFAQQTSKSLVSWPHLSFCNDAIVNEAESKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLSEKANFKDPFDQPILK* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5250 564 MobiDBLite consensus disorder prediction 442 466 - -
Psa6g5250 564 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 18 561 - -
Psa6g5250 564 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 18 561 - -
Psa6g5250 564 MobiDBLite consensus disorder prediction 451 466 - -
Psa6g5250 564 Coils Coil 531 551 - -
Psa6g5250 564 Pfam Aluminium activated malate transporter 83 549 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5250 Psa-Chr6 461816294 461818821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5250 80 556 Miscellaneous Gene Families AT1G25480 63.710 0.0 621
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5250 6 461816294 461818821 Psa6g5250 6 461816294 461818821 ECH