Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5241 ATGAACGCACATTCCTCTTCGATAATCTCAATGGCTTCTCCTTCTCCTTCCCAATCTCTCCGCAACTCAACATCCCTCCCTTTCTCAACTCTCATCCTCCCCCGCAACTCCTCCCATCGCCGCCGTCACTCTTCCTTCAAAATCCAAGCCAAGATCCGCGAAATCTTCATGCCTGCACTCAGTTCCACCATGACCGAGGGTAAAATCGTCTCGTGGATCAAATCCGAAGGCGACACTCTCTCCAAAGGTGATAGTGTTGTTGTTGTTGAATCGGATAAAGCTGATATGGATGTTGAGACTTTCTATGATGGAATTCTTGCTGCTATTGTTGTTTCTGAAGGTGAAACTGCTCCGGTTGGTGCTCCGATTGGTTTGCTCGCTGAGACTGCTGAGGATATCGCGGAAGCTCAAGCGAAAGCCAAATCGGTCAAATCCGGTTCCGGTTCTTCTTCTCCTCCTCCTGAAATACCTGACACTCCTCCGGTGACTTCTCAGTCTCCTTCTCCTCCTCCGCCACCACCGGTTAAGGCTGTTTCTGATGGTCCTAAGAAAATCACGGCAACACCTCAGGCTAAGAAACTTGCGAAGCAGCACAAGGTTGACATTGCTTCCGTCAATGGGACTGGTCCGTTTGGTAGGATTACTCCGGCTGACGTGGAGGCTGCTGCTGGGATTGTGCCGTCGAAGAGTAATGCACCTTCTGTAGTAGCTTCTGCTCCGGTGGCATCGGCTCCACCAAAAGCTGCTTCTTCTTCTGCTGCACCGCCTGCGTTGCCTGGTTCCAGTAATGTTGCTTTCACAACTATGCAGTCTGCTGTTGCTAAGAACATGGTGGAGAGTCTTTCTGTTCCTACGTTCCGTGTTGGATATCCGGTTACCACGGATGCTCTTGATGCTCTATATGAGAAGGTGAAACCTAAGGGTGTTACTATGACGGCTATATTGGCCAAGGCTGCTGCCATGGCACTTGTTCAGCATCCAGTTGTCAATGCCACCTGCAAAGACGGCAAGAACTTTCACTATAACAGTAACATTAATGTTGCTGTTGCCGTGGCAATCAATGGTGGTTTGATAACCCCAGTTCTTCAAGATGCTGATAAGTTGGACTTGTATCTGTTGTCCCAAAAATGGAAAGAGCTAGTTGGAAAGGCTCGTTCAAAGCAATTGCAACCTCATGAGTATAATTCAGGAACTTTCACGCTTTCAAACTTGGGTATGTTTGGAGTTGACAGGTTTGATGCCATACTTCCACCAGGCCAGGGGGCTATCATGGCTGTCGGAGCATCAAAGCCTACTGTTCTGGCTGATGCAGATGGATTCTTCAGGGTGAAAAATAAAATGCTGGTGAATGTAACAGCTGATCACCGAATAATTTATGGGGCTGACTTGGCTGCCTTCCTTCAGACATTCTCTAAAATCATTGAAAACCCAGAAAGCCTAACATTATAG 1449 0.4796 MNAHSSSIISMASPSPSQSLRNSTSLPFSTLILPRNSSHRRRHSSFKIQAKIREIFMPALSSTMTEGKIVSWIKSEGDTLSKGDSVVVVESDKADMDVETFYDGILAAIVVSEGETAPVGAPIGLLAETAEDIAEAQAKAKSVKSGSGSSSPPPEIPDTPPVTSQSPSPPPPPPVKAVSDGPKKITATPQAKKLAKQHKVDIASVNGTGPFGRITPADVEAAAGIVPSKSNAPSVVASAPVASAPPKAASSSAAPPALPGSSNVAFTTMQSAVAKNMVESLSVPTFRVGYPVTTDALDALYEKVKPKGVTMTAILAKAAAMALVQHPVVNATCKDGKNFHYNSNINVAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVGKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLADADGFFRVKNKMLVNVTADHRIIYGADLAAFLQTFSKIIENPESLTL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5241 482 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 262 481 IPR001078 GO:0016746
Psa6g5241 482 Gene3D - 183 223 IPR036625 GO:0016746
Psa6g5241 482 Gene3D - 48 151 - -
Psa6g5241 482 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 77 106 IPR003016 -
Psa6g5241 482 MobiDBLite consensus disorder prediction 153 178 - -
Psa6g5241 482 SUPERFAMILY CoA-dependent acyltransferases 264 481 - -
Psa6g5241 482 MobiDBLite consensus disorder prediction 137 199 - -
Psa6g5241 482 Pfam e3 binding domain 186 220 IPR004167 GO:0016746
Psa6g5241 482 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 186 223 IPR004167 GO:0016746
Psa6g5241 482 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 179 223 IPR036625 GO:0016746
Psa6g5241 482 ProSiteProfiles Biotinyl/lipoyl domain profile. 52 127 IPR000089 -
Psa6g5241 482 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 14 482 IPR045257 GO:0006086|GO:0045254
Psa6g5241 482 CDD lipoyl_domain 54 126 - -
Psa6g5241 482 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 14 482 - -
Psa6g5241 482 SUPERFAMILY Single hybrid motif 51 141 IPR011053 -
Psa6g5241 482 MobiDBLite consensus disorder prediction 1 22 - -
Psa6g5241 482 Gene3D - 245 481 IPR023213 -
Psa6g5241 482 Pfam Biotin-requiring enzyme 54 124 IPR000089 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5241 37 482 Acyl Lipid Metabolism Gene Families AT3G25860 76.009 0.0 639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5241 6 461144783 461149538 Psa6g5241 6 461144783 461149538 ECH