Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5193 ATGATTTGGAGACCAGATAGAAATCCATTAGATCTTAACAATCTCCCTGATGACATCTCTATAGATCATAATGATACACAACTTCTTCCTGACATCATCTCCTCACCACCAGGAAAAGGAAGGGTCTCATCAAAGTTACTAAAAAAGGATATTTTGGTTACAACAGTTACAGGTTATAAGGAAAAAGAAGGCGGCGAAGATGATAGAAAAGACGAGTGTGGAAAGGTCTACGAATGTAGATTTTGTTCCCTCAAATTCTGTAAGTCTCAGGCTCTTGGAGGACACATGAACCAGAAGGAAACGGAAAAGTTGAACAATGCTCGTCAGCTTCTCTTACGTAATGATCATAACCTTGTTGCTCAAGCTGCCCTTCAGTTAGGATGCTATCAAACAATGCCGATGAGGTTTCCAACGTCTTTCTCTGGTTCATCCGCCTCCTCAAGTCAAGCACCATCTCAGGTTCAGGTTCAGCAGTACTTGTATAATTCATCTTCAAGGCCAATTTCATTCCCTACACGATTCATTCCTCAGCATCAACAAATGAACGATTACCGTGGAGGAGGCGATAAGTCAAGTTACACATGCATAGGTGCACCAGTTGGACAAAGTTTTCCAGATCATACTCCAACGATCAATCGGTTTCAAGATGGTAATATGTAA 660 0.4121 MIWRPDRNPLDLNNLPDDISIDHNDTQLLPDIISSPPGKGRVSSKLLKKDILVTTVTGYKEKEGGEDDRKDECGKVYECRFCSLKFCKSQALGGHMNQKETEKLNNARQLLLRNDHNLVAQAALQLGCYQTMPMRFPTSFSGSSASSSQAPSQVQVQQYLYNSSSRPISFPTRFIPQHQQMNDYRGGGDKSSYTCIGAPVGQSFPDHTPTINRFQDGNM* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5193 219 Gene3D Classic Zinc Finger 44 126 - -
Psa6g5193 219 PANTHER ZINC FINGER PROTEIN JAGGED 4 208 IPR045320 GO:0003700
Psa6g5193 219 PANTHER ZINC FINGER PROTEIN JAGGED 4 208 IPR031113 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5193 Psa-Chr6 447135998 447137977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5193 6 201 C2H2 Transcription Factor Family AT1G13400 35.586 2.21e-20 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5193 6 447135998 447137977 Psa6g5193 6 447135998 447137977 ECH