Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5186 ATGCCCCACTGGCCTCGCATGGAAATCGCCTCCTCACGCCACCGCCGGAAAGACAAAGTCCTTGTCATCATGGGCGCCACCGGCTCCGGAAAATCACGTCTTTCAGTAGAACTCGCTAAGCTCTTCCCCTGTTTCGAGATAATCAACTCCGATAAAATACAAGTCTACCGAGGACTTGACATCACCACCAACAAGATCCCCTTTCATCAACGCAACAACGTCCCACATCATCTCCTCGGCGACGTTGATCCCTCCCACGGCGAGTTCTCCCCTTCAGATTTCCGCCTCCACGCCGGAGATTTAATCTCTGATATATCTTCCCGGCGGAAACTTCCCATTATCGTCGGAGGTTCCAACTCATTCCTTCACGCTCTCCTTGTAGAACGATTCAATCCTGAGTCAAATGTGTTTGAAGACGAGTCATCACCATCGATTTCCTCGGATTTAAGGTACAAATGTTGTTTTCTCTGGATGGATATATCATTCCCTGTATTATCCGAATATTTGCTGAAACGAGTCGATGACATGTTTGACTCGGGAATGGTGGACGAGTTAGCTGAGTTTTACAAACCGGGTTCGGATAACCGAACCGGGTTGAGAAAAGCTATCGGAGTACCAGAGTTCGACCGGTTTTTTAAACAATATCCACCAGCTGGACCCATTCAAGACGAAGTTCATAATCCAATGCGGGAAGGTGCATACCAGGAAGCAGTGAAGGCGATTAAGGATAACACGTGTCAGCTAGCCAAGAGACAGATAGGGAAGATCCTACGGTTAAAACGGGCTGGGTGGGACCTACGTAGACTTGACGCCACGGAGGCGTTTAGGTCGGTGCTAATGTCAGATTCTCACGGCGGTGACGGCGGAGGAGAAGAATTTTCCGACATTTGGAAAAAACAAGTGTTGGAACCAAGCGTGAAGATTGTGAAGCGATTCTTGATGGAGTAG 948 0.4873 MPHWPRMEIASSRHRRKDKVLVIMGATGSGKSRLSVELAKLFPCFEIINSDKIQVYRGLDITTNKIPFHQRNNVPHHLLGDVDPSHGEFSPSDFRLHAGDLISDISSRRKLPIIVGGSNSFLHALLVERFNPESNVFEDESSPSISSDLRYKCCFLWMDISFPVLSEYLLKRVDDMFDSGMVDELAEFYKPGSDNRTGLRKAIGVPEFDRFFKQYPPAGPIQDEVHNPMREGAYQEAVKAIKDNTCQLAKRQIGKILRLKRAGWDLRRLDATEAFRSVLMSDSHGGDGGGEEFSDIWKKQVLEPSVKIVKRFLME* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5186 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 191 IPR027417 -
Psa6g5186 315 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 12 314 - -
Psa6g5186 315 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 12 314 IPR039657 -
Psa6g5186 315 Pfam IPP transferase 54 130 - -
Psa6g5186 315 Pfam IPP transferase 144 253 - -
Psa6g5186 315 Gene3D - 17 313 IPR027417 -
Psa6g5186 315 CDD NK 20 72 - -
Psa6g5186 315 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5186 Psa-Chr6 446550791 446552295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5186 150 313 C2H2 Transcription Factor Family AT2G27760 31.351 4.93e-18 82.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5186 6 446550791 446552295 Psa6g5186 6 446550791 446552295 ECH