Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5167 ATGCAACATCTCCTTAATATAAACACATTAAGTGTCCCTCTTCTTGTCTCACACTTTCAAACTCTTTCTTCATCACAATTCCCAAACCCTTTCAACCTATTCAAACACTCCATGGATAACAACCACCACGATCACTACAACAACAAAACAACTTCCCAAACACGCCTTAAGCTCTTCGGCTTCCACGTCCAAGAAGACGAAACCATGCAAGATAATCTTCAAGACTCAACAAACAAAGCCACTTCCTCTTCCACCACTTCAACTTCCCCTTCAAGATCACCGGACTCCTCCGGTGCCGGTGAGGCTTTCACTTTCCCACCTTCCTCCGGCGAAAGAAAATACGAGTGTCAATACTGTTGTAGAGAGTTCGCAAATTCACAAGCACTTGGTGGACACCAAAACGCGCATAAGAAAGAGCGTCAACAACTCAAACGCGCTCAGTTACAAGCTAACCGAAACGCCGCCGTTTCGTTTGTTAGAAACCCGATGATCTCCGCCTTTGCTCCGCCGCAGCACTTGCTTGCTCCGCCAGGGTCCATGATGGTTCAACCTTCTTCGTGGGTTTACGTGCCGCCGCGTTCTGCTCCTCCTCCCTTCCACGTGTCGGTTTCTCACGGTTGCGTTTTCCCGTCGGCAAACGGAAACACCATGATGAGTGGGAACAATAATAGTAGTACTAATTTTGCGGGTGCAGGGATTTTTCCGTGTGTCGGCGTTGTAGGGGATTCAGGGTCCGCATTGTCAACGATGCAGGTACAAGCCCGGGCCCACATGATTGATGGGCCCTGTTTGAGTAGGTTCAGTGGGCCCAATTTTGATGATGCATTGGGCTTGGATTTGCACCTTAGTCTCGCACCAGCTGCGGCTCGCTCATACGGCTCGGCTCAGCTTAGTTATTCTAGATGCTCCCCTTAG 915 0.4951 MQHLLNINTLSVPLLVSHFQTLSSSQFPNPFNLFKHSMDNNHHDHYNNKTTSQTRLKLFGFHVQEDETMQDNLQDSTNKATSSSTTSTSPSRSPDSSGAGEAFTFPPSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQANRNAAVSFVRNPMISAFAPPQHLLAPPGSMMVQPSSWVYVPPRSAPPPFHVSVSHGCVFPSANGNTMMSGNNNSSTNFAGAGIFPCVGVVGDSGSALSTMQVQARAHMIDGPCLSRFSGPNFDDALGLDLHLSLAPAAARSYGSAQLSYSRCSP* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5167 304 SUPERFAMILY beta-beta-alpha zinc fingers 110 141 IPR036236 -
Psa6g5167 304 MobiDBLite consensus disorder prediction 70 98 - -
Psa6g5167 304 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 141 IPR013087 -
Psa6g5167 304 ProSitePatterns Zinc finger C2H2 type domain signature. 116 136 IPR013087 -
Psa6g5167 304 PANTHER ZINC FINGER PROTEIN 5 47 288 IPR044299 GO:0010090
Psa6g5167 304 PANTHER ZINC FINGER PROTEIN GIS3 47 288 - -
Psa6g5167 304 MobiDBLite consensus disorder prediction 70 106 - -
Psa6g5167 304 Gene3D Classic Zinc Finger 100 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5167 Psa-Chr6 445031093 445032840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5167 46 288 C2H2 Transcription Factor Family AT1G68360 44.444 3.83e-51 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5167 6 445031093 445032840 Psa6g5167 6 445031093 445032840 ECH