Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5155 ATGTGTAGCAAGTTAACAATTGTGAAACATAATTCAATGGCTTTAGTTTATGCAGTAGTACATCACAGGTTCATTTTGTTCTCTCATTCAACTCTGCTGCTACTGTTACTTATCTTAACTAGCAAAGGGGAAGGACACGGTGAGGATTGCCCAGACTCATTTGATTGTGGATATCTTCGGTCTATTCGCTACCCTTTTACCAAGGTTGGATTCCCAAACTGTGGTGCATTGCCAATTCAAGGTTGTGATGATGTTAACAAAACTGGAATCAAGACCATCCAGTTAACCAAAGGAGGAACACATTTTCAAGTTAGAAATATTGACTCATTCAAGGGTAACACAATTTCCATTATTGACCAGAATTTTATCAAGCTTTTGAGGACAAATGCTTGTGAAGTCTTCACCTATGTTAATATTATCCTCCCTCCTCCTTCTCCTTTAGGAACTTTTTATGTCAATGACAACATAACCGCTTTCAAATGCAACCGGACAGAAAAATTAGTCACCAACCCTCCAAACAATTTCTTCAAAAACAGTTCTTGTCCGAACTATGATTTTTATTTCGGTGGTTCAACATCCGATGATGAGCCTAATAACTCTTTCCCGTTGTGTTCGCCGTTTCATCTTCCTGTCATTGGATTAGGCTTTGCACTTTCTGGAAATCCATTTCCATTCTTAGCTCAAGATATTACCTTTAAGTTTAAACCTTCCGATGAGTGTGAACGGTGTCACCGTGATAAGAAAGGTCCTTGTCATGCTCGCAACAACGGACAAATTTATTGTGCAAGTAAGCGTAGAAGTTCATATTGGAAGCTACCATTGGTTTTAGGAGTCGGTGTAGGACCATGGATCATAGTTGGATTGTTCCTCACGCTAAGGTACTTCAAACGGAAATATGACTCTGCACACCTCCAACTCCAACCAAGCAACAGCGCCTATGTTGATCCTCATCCAAATGGTGAATTGGAGTCGAACAAACTCTTCTTTGGTATACCTGTCTTCTCCTACGAAGAGCTTCAACAAGCAACAAACAATTTCGACAGCACAAGAGCTTTAGGAGATGGAGGTTTTGGCACTGTTTACTACGGGAAACTCAAAGATGGAAGGGAGGTTGCTGTGAAAAGACTATTTGAGCACAATTACAGGAGAGTAGAACAGTTTGTGAATGAAATTGAATTACTCGCTCGCTTGCGCCATAGGAACCTTGTGTCTCTCTATGGCTGCACTTCCCGTCACAGCCGTGAGCTACTCCTTGTATATGAATACATTCCAAATGGAACTGTTGCTAGCCATCTCCATGGGGATTTAGCTAGGGCCGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCAATAGAAACTGCTTCTGCGTTGGCTTATCTACATGCTTCTGATATCATTCACCGTGATGTCAAAACCAACAACATTCTACTTGATGTTAACTTTTCTGTTAAGCTAGCAGATTTTGGACTATCGAGGCTGTTCCCGAACAATGTCAGCCATGTTTCGACTGCTCCACAAGGAAGTCCGGGTTACCTCGACCCTGAATATTTCCAACTTTATAAGCTCTCAGTGAAGAGTGATGTTTATAGTTTTGGCGTTGTGCTCATCGAGCTAATATCGTCTCTGAAAGCAATGGATTCTGCTAGAGAAAAAGAGGAAATTAACTTGGCGAATCTGGCGGCTAAGAAGATAAGAAAAGGTGCAATTGGGGAGCTGGTTCATCCATCACTTGGGTTTGAATCAGATAGTGAAGTTAAAAGGATGGTAAATTCAGTGGCTGAATTGGCATTTCAGTGCGTGCTAGGAAACATGGAGTTGAGACCTTCCATGGACCATGTTTTGCAAGAACTCAAGAAAATTGATGGTGGGAATTTTGAGTTTGATCACCTAGAGAAAATACGCGATTGTGTTGGGTCCTCGCGCTCGGAAGAAATACATCCACCATTAGATGAAACTTCCATGAATAAAAAGCAAGTATCTTCTTCACCAAAGTCATTGACTGAGATATGGGAAAGTGAATCTACTACTCCCAATGTCAGTGGTTAA 2049 0.4124 MCSKLTIVKHNSMALVYAVVHHRFILFSHSTLLLLLLILTSKGEGHGEDCPDSFDCGYLRSIRYPFTKVGFPNCGALPIQGCDDVNKTGIKTIQLTKGGTHFQVRNIDSFKGNTISIIDQNFIKLLRTNACEVFTYVNIILPPPSPLGTFYVNDNITAFKCNRTEKLVTNPPNNFFKNSSCPNYDFYFGGSTSDDEPNNSFPLCSPFHLPVIGLGFALSGNPFPFLAQDITFKFKPSDECERCHRDKKGPCHARNNGQIYCASKRRSSYWKLPLVLGVGVGPWIIVGLFLTLRYFKRKYDSAHLQLQPSNSAYVDPHPNGELESNKLFFGIPVFSYEELQQATNNFDSTRALGDGGFGTVYYGKLKDGREVAVKRLFEHNYRRVEQFVNEIELLARLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTVASHLHGDLARAGLLTWPIRMQIAIETASALAYLHASDIIHRDVKTNNILLDVNFSVKLADFGLSRLFPNNVSHVSTAPQGSPGYLDPEYFQLYKLSVKSDVYSFGVVLIELISSLKAMDSAREKEEINLANLAAKKIRKGAIGELVHPSLGFESDSEVKRMVNSVAELAFQCVLGNMELRPSMDHVLQELKKIDGGNFEFDHLEKIRDCVGSSRSEEIHPPLDETSMNKKQVSSSPKSLTEIWESESTTPNVSG* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5155 682 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 35 681 IPR044652 -
Psa6g5155 682 MobiDBLite consensus disorder prediction 639 682 - -
Psa6g5155 682 Pfam Protein kinase domain 348 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5155 682 Coils Coil 543 563 - -
Psa6g5155 682 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Psa6g5155 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Psa6g5155 682 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5155 682 Gene3D Transferase(Phosphotransferase) domain 1 423 626 - -
Psa6g5155 682 SUPERFAMILY Protein kinase-like (PK-like) 323 618 IPR011009 -
Psa6g5155 682 MobiDBLite consensus disorder prediction 654 682 - -
Psa6g5155 682 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 35 681 - -
Psa6g5155 682 Gene3D Phosphorylase Kinase; domain 1 320 422 - -
Psa6g5155 682 SMART serkin_6 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5155 Psa-Chr6 444363149 444365860 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5155 50 682 Receptor kinase-like Gene Family AT1G25390 44.892 5.17e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Psa6g5155 Pkinase 1.2e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5155 6 444363149 444365860 Psa6g5155 6 444363149 444365860 ECH