Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5139 ATGGAATCTCAATCCCAACAACTCCATGTTATTTTTCTACCACATCTAACTCCTGGTCATATGAACCCTGTGGTTGACACAGCAAGGCTATTTGCAAAACATGGTGTTAATGTTACCATTATCACCACACATGCAAATGCCTTGTTATTCAAGAAAGCCGTAGACCGCGACTTGTTATCTGGATATTCTATCAGAACTTGTGAAATTCAGTTCCCTTCATCCCAAGTTGGTCTCCCAGATGGAGTTGAAAACATCAAAGATGCTACTTCTCATGAAATGCTTGGCAAAATAATTCTTGGAATTGCAATGCTTCAAAGTCAAATAGAGCTTATGTTCCATGATCTGCAACCAGATTGTATAGTCTCGGATATGTTATATCCTTGGACGGTTGAATCGGCAGCAGAATTAGGCATCCCAAGGCTTTACTATTATAGCTCAAGCTACTTCTCAAGCTGTGCAGCTCATTTTATCAAGAAGCATAAGCCTTATGAGAATTTAGTTTCTGATACCCAAGTTTTTTCTATTCCTGGTCTTCCACATAACATTGAGATTACTTCTTTACAACTACAAGAATCGGTGAGGACCAAAAATGAATACTCAGATTATTTTGATGCAGTGTATGAATCAGAAGGAAGAAGCTATGGAACACTATACAATAGCTTTCATGAACTTGAAGATGATTATGAGCAACTTTATAAGAGCACAATGAGGACCAAAGCATGGAGTGTAGGACCAGTTTCAACATCTGTTAACAAGGGACACAATGAAGACCTCTCAATAGAGCCAAAATTGATTAATTGGCTTAATTCAAAGGCAAATGATTCTGTGTTGTATGTAAGTTTTGGAAGCTTGACAAGGCTTTGTTATGCTCAAATTGTTGAAATAGCTCATGGACTTGAAAATTCAGGTCATAATTTCATCTGGGTTGTGAGGAAAAAAGATGGAGACGAAGACAAAGACGGGTTTCTTCAAGGTTTTGAGGAAAGGATGAAGGAAAACCAGAAGGGCTACATCATATGGAATTGGGCACCACAGCTTCTGATATTGGATCACCCTGCAACAGGAGGGATTGTAACTCACTGTGGTTGGAACTCAATTCTTGAAAGCTTGAGTGTTGGTTTGCCAATGATCACATGGCCAATGTTTGCTGAGCAGTTTTACAATGAGAAGTTGCTTGTTGATGTTTTAAAGATAGGAGTTTGTGTTGGATCAAAAGTGAACAAGTTTTGGTCAAGTGTAGGTGAAGATGCATTGGTGAGAAGAGAAGAGATTGCGAAGGTTGTGACAATATTGATGGGAAGAGAAGATGAGAGTGGAGAAATGAGAAAGAGGGTAAGAAATTTTTGTGATGCTGCAAAGAAGAGTATAGAGAAGGGTGGATCCTCTTACAATAATTTGATGCAGTTAATAGGGGGAGATGAGTCTGAGAGACGAGTGATTAAGGAGAGAATGACGGAGGCTTGCATCCGAACCGCCGTAGAAGCCATACACTCCTCTTCATACCAAGCCGTTCTCTATCTTGCTGGTGGAGCTTCTCAGGCTCTAGGTTTATTGCTATCTGTTCCCGGTGCTTCAAATACTGTGCTCGAAGCTGTGGTTCCTTACTCTAGAATGTCTTTGATCCAGTTACTCGCCAAGATTCCATCCCAATTTTGTAGTCAACAGACTGCTGAAGATATGGCTTTGTTGGCTTATAATCGCGCTCTTAAACTCTCCGCTCCAGGATCCCCAGTTGTTGGTGTGGGCTTCACTGGTTCTTTGGCGAGCAGACGCCCAAAGCATGGGGAACACAGATTTTATATGTCAACAAGGACAGCTGACCGACTTTGGATATCAAGAGTGACCTTGACCAAGGGGCTTCGTACTCGAGAAGAAGAAGATAGAGTTTCTAGTCATCTTTTGCTCAAGGCTATTGCAAATGCATGTAAGGTTTCTTCAAACGCTATTCCGGAGATGAGTGAATCGGATGTATCTGATGAATGTGAAAAGCAATTCAATGAAGGTCAAGAGTTAGAACAAGTTATTAATGGTCAAATATACTTCAAGATTTATCCATTTAGAAGTGAGATGCCAGCAGAAAGGAAAATAATACTGCCTGGTTCTTTCAATCCCTTACATGACGGGCATCTCAAGCTCATGGAAGTTGCAACTCGCATTTGTGGTGATGGGTATCCATGCTTCGAAATATCTGCGGTCAATGCAGACAAACCTCCATTATCAGTGTCTCAGATCAAAGATCGCGTCAATCAATTTGAGAAAGCGGGACAGACAGTAATTATATCAAATCAGCCTTATTTTTATAAAAAGGCTGAACTTTTTCCGGGCAGTGCTTTTGTAATTGGTGCTGACACAGCAGTGAGGCTCGTTAATCCTAAATACTATGATGGGGACTACAACAAGATGCTGAAGATACTTATTGGCTGTAAAGAAACAGGATGCACCTTCCTTGTGGCTGGTCGAAATGTAGATGGTGTATTTAAGGTTCTTGAGGATTTGAATGTTCCAGAGGAATTAAAAGACATGTTCATCTCCATTCCAGCTGAACAGTTCCGCATGGACATATCCTCTACTGAGATAAGGAAAAAAAGCGGGATGTAA 2598 0.4069 MESQSQQLHVIFLPHLTPGHMNPVVDTARLFAKHGVNVTIITTHANALLFKKAVDRDLLSGYSIRTCEIQFPSSQVGLPDGVENIKDATSHEMLGKIILGIAMLQSQIELMFHDLQPDCIVSDMLYPWTVESAAELGIPRLYYYSSSYFSSCAAHFIKKHKPYENLVSDTQVFSIPGLPHNIEITSLQLQESVRTKNEYSDYFDAVYESEGRSYGTLYNSFHELEDDYEQLYKSTMRTKAWSVGPVSTSVNKGHNEDLSIEPKLINWLNSKANDSVLYVSFGSLTRLCYAQIVEIAHGLENSGHNFIWVVRKKDGDEDKDGFLQGFEERMKENQKGYIIWNWAPQLLILDHPATGGIVTHCGWNSILESLSVGLPMITWPMFAEQFYNEKLLVDVLKIGVCVGSKVNKFWSSVGEDALVRREEIAKVVTILMGREDESGEMRKRVRNFCDAAKKSIEKGGSSYNNLMQLIGGDESERRVIKERMTEACIRTAVEAIHSSSYQAVLYLAGGASQALGLLLSVPGASNTVLEAVVPYSRMSLIQLLAKIPSQFCSQQTAEDMALLAYNRALKLSAPGSPVVGVGFTGSLASRRPKHGEHRFYMSTRTADRLWISRVTLTKGLRTREEEDRVSSHLLLKAIANACKVSSNAIPEMSESDVSDECEKQFNEGQELEQVINGQIYFKIYPFRSEMPAERKIILPGSFNPLHDGHLKLMEVATRICGDGYPCFEISAVNADKPPLSVSQIKDRVNQFEKAGQTVIISNQPYFYKKAELFPGSAFVIGADTAVRLVNPKYYDGDYNKMLKILIGCKETGCTFLVAGRNVDGVFKVLEDLNVPEELKDMFISIPAEQFRMDISSTEIRKKSGM* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5139 865 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 392 IPR002213 GO:0008194
Psa6g5139 865 SUPERFAMILY Nucleotidylyl transferase 694 861 - -
Psa6g5139 865 Gene3D Glycogen Phosphorylase B; 11 466 - -
Psa6g5139 865 CDD GT1_Gtf-like 8 470 IPR002213 GO:0008194
Psa6g5139 865 PANTHER SOYASAPOGENOL B GLUCURONIDE GALACTOSYLTRANSFERASE-RELATED 4 471 - -
Psa6g5139 865 Pfam Cytidylyltransferase-like 698 861 IPR004821 GO:0003824|GO:0009058
Psa6g5139 865 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 470 - -
Psa6g5139 865 Gene3D Glycogen Phosphorylase B; 254 454 - -
Psa6g5139 865 PANTHER GLYCOSYLTRANSFERASE 4 471 - -
Psa6g5139 865 Gene3D HUPs 690 864 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5139 Psa-Chr6 443037080 443049776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5139 6 470 Glycosyltransferase AT2G15490 41.237 6.20e-121 373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5139 6 443037080 443049776 Psa6g5139 6 443037080 443049776 ECH