Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5131 ATGTTCCCTTTTCTCTTCCTCCATCTTCTTCTCTTCTGCAACACTTTCACACCTCTAGTGAATTCTCTAAACCCTGAAGGCTATGTCCTCTTAACACTCAAACACTTCATCACTGACCCACAAGGCTCCATGAACAACTGGAACTCTTCTGATCAAAACCCATGTTCATGGAACGGAATCACCTGCAAAGACCAAACCGTTGTTTCCATCAGTATCCCAAAAAGGAAACTTCATGGTTCTCTTCCTCCTTCTCTAGGATCTCTCTCACACCTTCGTCATCTCAACTTCAGAAACAATCAACTCTTTGGTACTTTACCTCAAGAGCTTTTTCAAGCCACAGGTCTTCAAAGTTTGGTGCTTTATGGAAATTCCTTTTCCGGGTCTGTTCCAAATGAGATTCAGAATCTTAGGTACCTTCAAACTCTTGATTTGTCTCAGAATTTCTTTAACGGCTCATTACCTGATTCAGTTCTTGAATGTAAGAGACTTAAAGCTCTTGTTTTGAGTAGAAACAATTTTACTGGCTTTTTGCCTGATGGATTTGGTGCTGGTTTGTCTTCACTTGAAAAGCTTGATCTTTCTTTCAATGATTTTCATGGTTTGATTCCTAGTGACATTGGAAATTTGTCAAGTTTGCAAGGGAATCTTGATTTGTCTCATAATCTTTTTAGTGGTTCGATTCCAGCTAGTCTTGGAAATTTGCCTGAGAAGGTTTATATTGATCTTACATACAATAATTTGAGTGGTTCAATACCACAAACCGGTGCTTTGATGAATAGAGGACCAACTGCTTTTATTGGAAACCCTGGCTTATGTGGCCCACCTTTGAAGAATCCATGTGGCTCTGATGTTTCTGTTCCAGTTCCAGCTACTAGTTTACCTTCCTCAAATCCAAAACTTCCTGGTTCTGAGAAAAACAAAGGGCTGAGTAAAGGTGCTGTGGTTGGGATTGTTGTTGGTGATTTAATAGGAATTTGTCTTTTAGGTTTGTTGTTCTCGTTCTTTTACTCGAGGGTTTGCGGTTTTAATCAGGATCAGGATGATGAGAATGATGTTAACAACAAGAGAATGAAAAGAGGGAAAGAGTGTTTTTGTTTCAGAAAAGATGGATCTGAGGTACTATCTGATAATGTTGAGCAATATGATCTTGTTCCATTAGATTCACAAGTTGCTTTTGATTTGGATGAGCTTCTTAAGGCTTCGGCTTTCGTTCTTGGTAAGAGTGGAATAGGGATTATGTACAAAGTTGTGCTTGAAGAAGGGCTTGCTCTGGCTGTTAGAAGATTGGGGGAAGGTGGTTCTCAAAGGTTTAAAGAGTTTCAAACGGAAGTAGAAGCTATTGGGAAGTTAAGACATCCAAATGTTGCTACTCTTAGAGCTTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGACTATGTTCCGAATGGAAGCCTCGCTACAGCAATTCATGGGAAGGTTGGACTTGCCACATTTGCACCGCTAACTTGGTCGGACCGGTTGAAAATCATGAAAGGAACAGCAAAAGGAGTGGTCTATCTGCATGAATTCAGCCCCAAAAAGTATGTCCATGGAGATCTAAAGCCAAGTAACATACTTCTTGGACATGATATGACACCCTACATTTCCGATTTCGGACTAGGCCGTCTTGCAAACATCGCGGGCACTTCCCCGACCCTTCAATCAAACCGAGTAGCTGCGGAAAAACTGCAAGAAAGACAGAAGAGTCTGTCCAATGAAGTCGCAGCAAATATTTTAGGAAACGGCTATCAAGCTCCAGAAGCTTTAAAAGTGGTGAAACCGTCGCAGAAATGGGATGTTTATTCATACGGCGTGATTTTGTTAGAAATGATCACAGGAAGATTACCTATTGTTCAAGTAGGTAACACAGAAATGAACCTTGTTCAATGGATTCAGTTCTGCATTGAAGAGAAGAAGCCACTCTCGGATGTATTAGATCCATATTTAGCCGAAGACGCAGACAGAGAGGAAGAAATAATTGGAGTTTTGAAGATCGCAATGGCTTGTGTTAATAGCAGCACTGAAAAAAGACCTACAATGAGGCATGTTCTTGATGCTTTGGATAGATTGTCTGTTTCATCTGATTGA 2112 0.4044 MFPFLFLHLLLFCNTFTPLVNSLNPEGYVLLTLKHFITDPQGSMNNWNSSDQNPCSWNGITCKDQTVVSISIPKRKLHGSLPPSLGSLSHLRHLNFRNNQLFGTLPQELFQATGLQSLVLYGNSFSGSVPNEIQNLRYLQTLDLSQNFFNGSLPDSVLECKRLKALVLSRNNFTGFLPDGFGAGLSSLEKLDLSFNDFHGLIPSDIGNLSSLQGNLDLSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGSIPQTGALMNRGPTAFIGNPGLCGPPLKNPCGSDVSVPVPATSLPSSNPKLPGSEKNKGLSKGAVVGIVVGDLIGICLLGLLFSFFYSRVCGFNQDQDDENDVNNKRMKRGKECFCFRKDGSEVLSDNVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIMYKVVLEEGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNVATLRAYYWSVDEKLLIYDYVPNGSLATAIHGKVGLATFAPLTWSDRLKIMKGTAKGVVYLHEFSPKKYVHGDLKPSNILLGHDMTPYISDFGLGRLANIAGTSPTLQSNRVAAEKLQERQKSLSNEVAANILGNGYQAPEALKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGNTEMNLVQWIQFCIEEKKPLSDVLDPYLAEDADREEEIIGVLKIAMACVNSSTEKRPTMRHVLDALDRLSVSSD* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5131 703 SUPERFAMILY Protein kinase-like (PK-like) 404 695 IPR011009 -
Psa6g5131 703 Pfam Protein kinase domain 405 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5131 703 SMART LRR_typ_2 136 160 IPR003591 -
Psa6g5131 703 SMART LRR_typ_2 88 112 IPR003591 -
Psa6g5131 703 SMART LRR_typ_2 185 208 IPR003591 -
Psa6g5131 703 Gene3D Phosphorylase Kinase; domain 1 372 474 - -
Psa6g5131 703 CDD STKc_IRAK 405 698 - -
Psa6g5131 703 SUPERFAMILY L domain-like 25 277 - -
Psa6g5131 703 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Psa6g5131 703 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 702 - -
Psa6g5131 703 Gene3D Transferase(Phosphotransferase) domain 1 475 703 - -
Psa6g5131 703 ProSiteProfiles Protein kinase domain profile. 399 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5131 703 Coils Coil 561 581 - -
Psa6g5131 703 Gene3D Ribonuclease Inhibitor 76 283 IPR032675 -
Psa6g5131 703 Gene3D Ribonuclease Inhibitor 18 75 IPR032675 -
Psa6g5131 703 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 702 - -
Psa6g5131 703 SMART serkin_6 404 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g5131 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Psa6g5131 703 Pfam Leucine rich repeat 89 147 IPR001611 GO:0005515
Psa6g5131 703 Pfam Leucine rich repeat 162 222 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5131 Psa-Chr6 442103972 442106375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5131 1 703 Receptor kinase-like Gene Family AT2G01210 65.972 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa6g5131 Pkinase 1.3e-30 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5131 6 442103972 442106375 Psa6g5131 6 442103972 442106375 ECH