Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5113 ATGCATAACCATCACCATCACCATCAAAATGGTTCCTTGGAACGCAGAGCTCAAGCTTCCAACGGAGACATTGCTACTAACGGCAGCAATGGTGTTGTTGGTGCTTCCAATTCCATAACCAGACTTCTCGGAAACCCTAGAATTGATCACATGCCTGATAATTATGAAGATCTTCCTTTGGATTTCAACCCTCTTGTTTTCACTTCACTCGAGAGACATCTTCCTTCTCATATTCTTAACCTATCTAGAGACCTCAAAGCTCACTACATGTCCAACATTCTACTCCGTTATTTGCCTCACAGCGAACGCATTAGGATGCAAAAGCAGAAGGAATACAGGCAAAATATAATATTAAATTATCCTCCGCTTCATAAGGAGATGTATACTATGCTCAGTGAAAACTTTTTTGCACCCTCATTTCTCAGAGCTATTAAAGAAAATACAGAAGCGGGTTTCAGAAGTATATTGGCAGAACCCTCCAGAGGAATTTATACGTTTGAAATATTTCAACCACATTTTTGTGAAATGTTGGTATCTGAGGTAGATCATTTTGAAAGATGGGTCCATGAGACCAAATTCAGAATCATGCGACCTAATACAATGAATCAATATGGTGCTGTTCTTGATGATTTTGGCCTGGAATCCATGCTTGATAAATTGATGAATGATTTCATACGTCCTATAGCTCGAGTTTTCTTTTCTGAAATTGGTGGATCCACACTGGACTCTCATCATGGTTTTGCTGTTGAATATGGAACCAATAGAGATGTGGAACTTGGGTTCCACGTGGATGATGCAGAAGTCACCTTAAATATTTGCCTGGGAACACAGTTTTCAGGTGGAGAATTGTTCTTCCGAGGCGTTCGATGTGATGAACATGTGAATACAGAGACCCAATCAGGGGAAATATTCGATTATCCTCATGTTCCAGGACAGGCAGTCCTTCATTCTGGTCGCCACCGTCATGGTGCCAGACCTACAATATCTGGGAATCGGATCAACTTAATTCTATGGTGTAGAAGTTCGGCATTTAGAGAGATCAAGAAATACCAAAGAGAATTTCCTAGCTGGTGTGGAGAATGTAAACGCAAGAAGAAGGAAAGAGAGCGTATTGCAGTTTCTGCCACAAAAGCGGAATTACTGAAAAGGGAGCTTAAATCAGCCTCATGA 1170 0.4085 MHNHHHHHQNGSLERRAQASNGDIATNGSNGVVGASNSITRLLGNPRIDHMPDNYEDLPLDFNPLVFTSLERHLPSHILNLSRDLKAHYMSNILLRYLPHSERIRMQKQKEYRQNIILNYPPLHKEMYTMLSENFFAPSFLRAIKENTEAGFRSILAEPSRGIYTFEIFQPHFCEMLVSEVDHFERWVHETKFRIMRPNTMNQYGAVLDDFGLESMLDKLMNDFIRPIARVFFSEIGGSTLDSHHGFAVEYGTNRDVELGFHVDDAEVTLNICLGTQFSGGELFFRGVRCDEHVNTETQSGEIFDYPHVPGQAVLHSGRHRHGARPTISGNRINLILWCRSSAFREIKKYQREFPSWCGECKRKKKERERIAVSATKAELLKRELKSAS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5113 389 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 387 - -
Psa6g5113 389 Gene3D q2cbj1_9rhob like domain 160 341 - -
Psa6g5113 389 SMART p4hc 161 340 IPR006620 GO:0005506|GO:0016705|GO:0031418
Psa6g5113 389 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 242 341 IPR005123 -
Psa6g5113 389 SUPERFAMILY Clavaminate synthase-like 190 350 - -
Psa6g5113 389 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 18 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5113 Psa-Chr6 441046299 441051201 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5113 6 441046299 441051201 Psa6g5113 6 441046299 441051201 ECH