Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5093 ATGGCTGCTGTTACTAATTTTACATATTCAGCTTCTCCCTTTCTTGTAAGGTGCTGTTCTATGAAAGAAAATCATCATGAACAATTGAATGGTAACAGTAGCATACGGATGAATGGGAGTTTTAGGTCTCCGATAAAAGTCGAATCACTTAGTCAAACAGCTGAAGCTGCACCTACAACTCTTGTTGAAAACGGCCAACGACAGAACATACCGACAAAGAAGCAATTGGTTGATTCCCATCGTCAAGGTCTCATTGTTGGTGTTGGTTATAGACAGACCGTCGTCATTAGGTCCTATGAAGTCGGTCCTGATAAAACCGCAACACTTGAAAGCATCCTCAATCTTCTTCAGGAAACAGCATTGAACCATGTATGGATGTCTGGATTACTGAGTGATGGGTTTGGAGCAACACATGGAATGATGAAGAATGATCTCATATGGGTTGTTTCAAGAATGCAAGTTCTCATTGATTATTATCCCATCTGGGGAGAGGTACTTGAAATCGACACATGGGTTGGAGCATCGGGCAAGAACGGAATGCGACGCGACTGGCTCATAAGAAGTCAAGCCACAGGCCAAATTTTCGCCCGCGCAACAAGCACATGGGTGATGATGAACCGTAAAACAAGACGCCTCTCGAAAATGCCAGAAGAGGTGAGGGAAGAACTCGCACCTTGGTTTATTTCAAACCAAGCAATCAAAGAAGACGCTCCCGAAAAAATCGTCAAATTGAACAAAGAGGCGAAATACACGAACTCCAATTTAAAGCCTAAGAGAAGTGACTTAGACATGAACCAACATGTTAATAATGTAAAGTATCTAAGATGGATGCTAGAGACCATACCAGATCAAATTCTAGAGAGTCACCAATTATCTGGAATCATATTAGAATATAGAAAGGAATGTGGAAGTTCAGATATAGTTGAGTCACTATGTGAACCTGAAGAAGATGAAATAGTAGTTAATGGAATTATTGAACCAGATTATTGCACAAATTTGATCAATGGATTATCATTGGCATCATCAGATATTATAAATGGTGGTGGAGTTTTGAGCTACCTTGAGCATAGGCCAATGAAGTATACACATCTTTTACAAGCTAAGGGAGAAAAACAAAATGAAGAAATTGTTAGAGGAAAAACTACATGGAAGAGGAAATTCACTACATGTCCATTTTCTACATAG 1185 0.3975 MAAVTNFTYSASPFLVRCCSMKENHHEQLNGNSSIRMNGSFRSPIKVESLSQTAEAAPTTLVENGQRQNIPTKKQLVDSHRQGLIVGVGYRQTVVIRSYEVGPDKTATLESILNLLQETALNHVWMSGLLSDGFGATHGMMKNDLIWVVSRMQVLIDYYPIWGEVLEIDTWVGASGKNGMRRDWLIRSQATGQIFARATSTWVMMNRKTRRLSKMPEEVREELAPWFISNQAIKEDAPEKIVKLNKEAKYTNSNLKPKRSDLDMNQHVNNVKYLRWMLETIPDQILESHQLSGIILEYRKECGSSDIVESLCEPEEDEIVVNGIIEPDYCTNLINGLSLASSDIINGGGVLSYLEHRPMKYTHLLQAKGEKQNEEIVRGKTTWKRKFTTCPFST* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5093 394 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 88 235 IPR029069 -
Psa6g5093 394 CDD 4HBT 90 206 - -
Psa6g5093 394 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 12 387 IPR045023 GO:0006633|GO:0016297
Psa6g5093 394 Pfam Acyl-ACP thioesterase 89 384 IPR002864 GO:0006633|GO:0016790
Psa6g5093 394 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 12 387 - -
Psa6g5093 394 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 251 383 IPR029069 -
Psa6g5093 394 Gene3D Hotdog Thioesterase 87 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5093 Psa-Chr6 440013604 440016177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5093 76 394 Acyl Lipid Metabolism Gene Families AT1G08510 46.273 5.59e-92 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5093 6 440013604 440016177 Psa6g5093 6 440013604 440016177 ECH