Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5088 ATGGAAAAGGGTTTGTTAGAGAAAGATAGAGAAGGTGAATTAGGAAGAAGCATAACGTGGGGTTTGCTCGTTCGAGAGGTGAAAGATGTTGGTTTTCTAGCTTTGCCTATGATTACTGTGACTCTGTCGCAGTATTTTTTACAGATTATTTCAATGATGATGGTTGGTCGGTTGGGTAAACTTGCTCTTTCTAGTACTGCCATTGCTATCTCTCTTTGCGGTGTTTCTGGCTTCAGTCTTCTTTATGGAATGTCTTGTGCACTTGAAACTATATGTGGACAAGCTTATGGTGCAAAGCAATATAAAAGAGTTGGTGTTCAAATCTACACCGGTATCATTTCTCTTGTTCTCGTTTGTGTTCCTCTCTCAATATTATGGCTCAACTTGGGGAAGCTACTGACTTTACTTGGTCAAGACCCTTTGATTTCGCAAGAAGCCGGAAAATTTGCAATGTGCATGATTCCTGCTTTATTTGCTTTTGCAACACTTCAAGCATTGGTCAGATACTTTCTGATGCAAAGTTTGATAACCCCACTTGTTATAAGTTCTTCCGTTACACTTTGCTTCCATGTAGCTTTTTGCTGGTTGCTGGTTTTTAAATCTGGATTAGGTTGCTTTGGAGCTGCGTTTTCTATTGGTACTTCGTATTGGTTGAATGTGATTATACTTGGATTGTACATGAATTTCTCTTCTGATTGCGAAAAAACTCGGGTTCCAATTACTATGGAGTCGTTTGTTGGAATAGGAGAGTTCTTTCGCTGCGCTATTCCTTCAGCAGGAATGATTTGCCTTGAATGGTGGTCGTTTGAGCTCCTAGTCCTTCTTTCCGGTCTTCTACCAAATCCACAGCTTGAAACTTCAGTCTTATCGATATGTTTATCAATCATCTCAACATTATATACAATTCCAGAAGCAACTGGCTCGGCTGCAAGCACTAGAGTTTCAAATGCATTAGGAGCTGGACATCCACAAGCAGCGCGATTGTCTGTGTATGCTTCTATGACTCTTGCTGTTTCCGAGGCAATTTTGGTTAGTTCCACCATTTTCGCCTCTCGACGGATTGTTGGTTATATATTTAGCAACGAGCAGGATGTGGTGCATTATGTAACAGCTATGGTTCCTCTGATAAGTCTAAATGTTATAGTGGATAGTTTACACGGCACACTTTCAGGTATTGCTAGAGGATCTGGTTGGCAGAAGTTGGGAGCATATGTGAATCTTGGAGCTTATTATGCTTGTGGAATTCCAATTGCTGTTGTGTTGGGTTTCTGGTTTGAGTTGAGAGGAAAAGGACTGTGGATTGGGATACTTGTTGGTGCCTTCTGTCAAGCACTTTTGTTATTCCTTATAACAAGTTTCACAAACTGGGAAAAACAGGCAACTAGAGCAAGGGAAAGAGTATTTGAAGGAAGTTTTGCAGAAGAAGATAGGATAGTTTTGAGCTAA 1446 0.4053 MEKGLLEKDREGELGRSITWGLLVREVKDVGFLALPMITVTLSQYFLQIISMMMVGRLGKLALSSTAIAISLCGVSGFSLLYGMSCALETICGQAYGAKQYKRVGVQIYTGIISLVLVCVPLSILWLNLGKLLTLLGQDPLISQEAGKFAMCMIPALFAFATLQALVRYFLMQSLITPLVISSSVTLCFHVAFCWLLVFKSGLGCFGAAFSIGTSYWLNVIILGLYMNFSSDCEKTRVPITMESFVGIGEFFRCAIPSAGMICLEWWSFELLVLLSGLLPNPQLETSVLSICLSIISTLYTIPEATGSAASTRVSNALGAGHPQAARLSVYASMTLAVSEAILVSSTIFASRRIVGYIFSNEQDVVHYVTAMVPLISLNVIVDSLHGTLSGIARGSGWQKLGAYVNLGAYYACGIPIAVVLGFWFELRGKGLWIGILVGAFCQALLLFLITSFTNWEKQATRARERVFEGSFAEEDRIVLS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5088 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 466 - -
Psa6g5088 481 Pfam MatE 36 196 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa6g5088 481 Pfam MatE 257 419 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa6g5088 481 CDD MATE_eukaryotic 26 462 IPR045069 GO:0042910|GO:1990961
Psa6g5088 481 TIGRFAM matE: MATE efflux family protein 36 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa6g5088 481 PANTHER PROTEIN DETOXIFICATION 5 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5088 Psa-Chr6 439978688 439981950 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5088 6 439978688 439981950 Psa6g5088 6 439978688 439981950 ECH