Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5079 ATGTCCGTGATGAATTTGATTATGTGTTTGTTTCTGTGCACGCTTTCTGTTTGTTGTTTTGCTTCTTCACATCGTTCGATCCTTCGTGAGGTTAGCGATAATGATCGAAGTGGAATTGATCGGGATTATGCCGTGGAGCTTAATGCAACTAGTTTTGATGATGTTTTGAAGGATACTCCTGCTACGTTTGCTATTGTTGAATTCTTTGCGCATTGGTGTCCTGCTTGCAGGAATTATAAGCCTCAGTACGAAAAGGTTGCAAGGTTATTTAATGGACCTGATGCAGTGCATCCTGGAATCATATTATTGACAAGGGTGGATTGTGCAGAAAAGATAAATACTAAGCTCTGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTCTTTTGGGGCGCTCCTCCTAAATTTGTAGGTGGTAGTTGGGAACCGAAACAAAAGAACAGTGATATAGAGGTGATTGATAATGCACGCACAGCTGATCAATTGCTTACTTGGATTAACAAACAAACGTCCAGTTCATTTGGATTGGATGATCAGAAGTTTCAAAATGAGCATCTTTCATCTAATGCGTCAGACCCCCAACAGATTGCAAGAGGTATCTATGATGTTGAAGAGGCAACTTCATTAGCTTTTGACATCATCTTGGAGCACAAGATGATAAAACCAGAAACTCGTGCTTCACTTTTGAAGTTTCTCCAGCTTTTGACTGCTCATCATCCTTCTAGGAGATGCAGGAAGGGCGCTGGAGACTTACTTGTGAGCTTTGATGACTTATACCCAACAGACTCTTGGTCATCTCATAAGCAAGAAGAAGATAAGAGTTTGGCTAAGAACTTTCAGATTTGCGGAAAAGAAGTGCCACGTGGATATTGGATGTTCTGTCGGGGTAGTAAGAATGAAACCAGAGGCTTTAGCTGTGGCTTATGGGTTCTTCTACATTCACTCTCCGTAAGGATTGAGGATGCAGAGAGTCAGTTTACATTTACTGCAATCTGTGATTTTGTTCACAACTTCTTTGTCTGCGAGGAATGCCGACAACATTTTTACAAGATGTGTTCAAGTGTTTCTAGTCCTTTCAACAAAGCCCGCGACTTTGCACTCTGGTTGTGGAGTACCCATAACAAGGTAAACGAAAGGCTGGGGAAAGAAGAAGCTTCTCTAGGTACCGGCGATCCCAAATTCCCAAAGACAGTTTGGCCTCCAAAGCAGCTTTGCTCTTCCTGTTACCTTGACCATGACCAAACAAGCAACAAAATTGAATGGAACCAGGATGAAGTCTACAAGGCTCTGAGAAATTATTACGGGAAAACACTCGTTTCTCTGTACAAGGAGAAGGGTATTGCTGGAACCGAAGGAGCTGAAGGAGCCACCCTAGAAGATTTAACAGTCGGGACGAATGCAGTTGTGGTGCCGGTTGGAGCTGCTTTGGCAATTGCTGTTGCTAGCTGTGCCTTTGGAGCACTCGCATGCTACTGGCGTTCACAACAAAAGAGTCGGAAGCCAAGGAGAACATGGAATTAG 1521 0.43 MSVMNLIMCLFLCTLSVCCFASSHRSILREVSDNDRSGIDRDYAVELNATSFDDVLKDTPATFAIVEFFAHWCPACRNYKPQYEKVARLFNGPDAVHPGIILLTRVDCAEKINTKLCDKFSVGHYPMLFWGAPPKFVGGSWEPKQKNSDIEVIDNARTADQLLTWINKQTSSSFGLDDQKFQNEHLSSNASDPQQIARGIYDVEEATSLAFDIILEHKMIKPETRASLLKFLQLLTAHHPSRRCRKGAGDLLVSFDDLYPTDSWSSHKQEEDKSLAKNFQICGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRIEDAESQFTFTAICDFVHNFFVCEECRQHFYKMCSSVSSPFNKARDFALWLWSTHNKVNERLGKEEASLGTGDPKFPKTVWPPKQLCSSCYLDHDQTSNKIEWNQDEVYKALRNYYGKTLVSLYKEKGIAGTEGAEGATLEDLTVGTNAVVVPVGAALAIAVASCAFGALACYWRSQQKSRKPRRTWN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5079 506 Gene3D ERV/ALR sulfhydryl oxidase domain 292 443 IPR036774 GO:0016972
Psa6g5079 506 SUPERFAMILY FAD-dependent thiol oxidase 298 402 IPR036774 GO:0016972
Psa6g5079 506 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 12 501 IPR039798 GO:0016971
Psa6g5079 506 Pfam Erv1 / Alr family 306 400 IPR017905 GO:0016972
Psa6g5079 506 Pfam Thioredoxin 45 129 IPR013766 -
Psa6g5079 506 ProSiteProfiles ERV/ALR sulfhydryl oxidase domain profile. 297 399 IPR017905 GO:0016972
Psa6g5079 506 ProSiteProfiles Thioredoxin domain profile. 25 171 IPR013766 -
Psa6g5079 506 ProSitePatterns Thioredoxin family active site. 65 83 IPR017937 -
Psa6g5079 506 Gene3D Glutaredoxin 31 197 - -
Psa6g5079 506 PANTHER SULFHYDRYL OXIDASE 12 501 - -
Psa6g5079 506 SUPERFAMILY Thioredoxin-like 44 170 IPR036249 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5079 6 439618710 439622998 Psa6g5079 6 439618710 439622998 ECH