Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5040 ATGGGAGCTGAGAAAAAATGGCTTTTCACGCTATTCACTGCAGCGGTTTTATCTCTGATGTTACTGTTAATGTCATCTTTTTCAACCTTCAGTTCACAAAAGCCTTTTCCTTCCATTGTTCAACATGGTTCTCATTACCCTCCTGCTTTTGCTTACTTTATCTCTGGTGGGCATGGTGATAAAGACCGGATCTTTCGTTTGTTGTTGGCAGTTTACCATCCGAGGAACCGTTACTTGCTTCATCTTGGAATGGATGCTAGGCAAGAAGAGAGACAGGATTTGGCTGATGATGTTGGTTCGGTTCCCGCGATTCGGGCTTTCGGGAATGTTGATGTTGTTGGTAAGGCTGATTGGATTACATACTTGGGATCTTCTAATGTTGCTATTGCTCTACGTGCTGCTGCCATTATGCTTAAATTGGATAGTGGGTGGAGTTGGTTTATTACAAGAGAGAGATGTTCTTGTATTTATCATTTTCTCGATCAGGATGATAGATTCCAACCTATTGTAGTTGACCCGGGAACATATTTAGCTAGGAGAAGTCAAATATTTCAAGCTACAGAGAAAGAGGACAACACCCGATGCATTCAAACTCTTCACTGGTTCACCGTGGGTCACCTTGAGCCGACCTTTTCTAGAGTTCTGCATTTTTGGATATTACGATGTNTATGGGACAATCCTCCGAAGATGGAACCTCTCTTCCTTAATACATCGGTTTATGATATGATGGCAGAAAGCGGAGCAGCTTTTGCAAGACAGTTCCAGGCCAATAACCCTGTTCTGGATTTGATAGACAAAAAAATTCTGCGACGCGGTCGGAATCGAGCCGCCCCAGGGGCATGGTGCTCAGGACGGGGAAGCTGGTGGGTGGATCCATGTTCCCAGTGGGGCGATGTCGATATTCTGAAGCCAGGTCCTCAGGCTAAGAAGCTAGAGGCGTCTGTTTCTAGTCTTCTTGATGACTGGACGTCACAGACGAATCAGTGCCAGTAA 993 0.4502 MGAEKKWLFTLFTAAVLSLMLLLMSSFSTFSSQKPFPSIVQHGSHYPPAFAYFISGGHGDKDRIFRLLLAVYHPRNRYLLHLGMDARQEERQDLADDVGSVPAIRAFGNVDVVGKADWITYLGSSNVAIALRAAAIMLKLDSGWSWFITRERCSCIYHFLDQDDRFQPIVVDPGTYLARRSQIFQATEKEDNTRCIQTLHWFTVGHLEPTFSRVLHFWILRCXWDNPPKMEPLFLNTSVYDMMAESGAAFARQFQANNPVLDLIDKKILRRGRNRAAPGAWCSGRGSWWVDPCSQWGDVDILKPGPQAKKLEASVSSLLDDWTSQTNQCQ* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5040 330 Pfam Core-2/I-Branching enzyme 50 153 IPR003406 GO:0016020|GO:0016757
Psa6g5040 330 PANTHER OS01G0121800 PROTEIN 223 330 - -
Psa6g5040 330 PANTHER OS01G0121800 PROTEIN 162 193 - -
Psa6g5040 330 PANTHER OS01G0121800 PROTEIN 2 164 - -
Psa6g5040 330 PANTHER GLYCOSYLTRANSFERASE 223 330 IPR044610 GO:0015020
Psa6g5040 330 PANTHER GLYCOSYLTRANSFERASE 162 193 IPR044610 GO:0015020
Psa6g5040 330 PANTHER GLYCOSYLTRANSFERASE 2 164 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5040 Psa-Chr6 435970754 435973825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5040 1 330 Glycosyltransferase AT1G71070 47.990 2.18e-117 343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5040 6 435970754 435973825 Psa6g5040 6 435970754 435973825 ECH