Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4134 ATGGCTTCCGATACCGCTTCTCGTTCGAGTTCCGCGGCCGATTCCTACATTGGTTGCTTGATCAGTTTGACGTCCAAGAGCGAGATCAGATACGAGGGCGTTCTCTACAACATCAACACCGATGAATCCAGTATTGGCCTCAAAAATGTGCGCTCTTTTGGAACTGAAGGAAGGAAAAAGGACGGTCCACAAATTCTGCCAGGTGACAAGGTCTATGAGTATATACTCTTCCGTGGGACGGACATCAAGGATTTACAGGTGAAATCTTCTCCACCTGTCCAGCCTACTGCACCAACAAATACCGACCCAGCTATTATTCAGTCTCAGTATCCCCGCTTAGCCACAACATCGACAAGTTTACCAGCTGCAAGTGGATCTTTGACTGATGCTAGTCCTCATACAACACAGCTTGGACACCCAGGGTCAAACTTTCAAGGGCCTTTGTATCAACCTGGAGGAAATGTAGTATCATGGGGAGCTTCTTCGCCTTCTCCAAATGTAAATGGTGGCGGGCTTGCTATGCCAATGTATTGGCAAGGATATTATGGTGCCCCAAATGGGCTTCCTCAGTTACATCAGCAATCTTTGCTACGACCTCCTGGCTTATCCATGCCTTCATCTATGCAGCAGCCAATGCATTCATCTATGCAGCAGCCTATGCCTCCGTCTTTGCAGCAGCACATGCCTTCGTCGATGCAGCAGCCATTGCCTTCATCGATGCAGCAGCCATTGCCTTCATCGATGCAGCAGCCATTGCAGTATCCCAATTTTAGCCCCTCTTTACCAACTGGGCCTTCCAATTTTCCAGAATTTCCTTCTGCTTTCCTCCCTGTGGGCACTAGTTCCCCTAATATAACAGCTACTTCTGCACCTCCATCAAATCTTCCGACAACAGTTTCACCTCCAGCACCTTTGGCCACACTAGCTCCTGAAACTTTTCAAGTATCAGTTCCAAACAAGGCACCATCTGTGTCCCTTCCTGCAGTCACATTAGGTGCTAACTTGTCTTCACTAGCTTCTTTTACCAATGGGGGTCACGATATGAGTGCTTCTGTAGCAATGGCTAATAAACCTAATGCAATTTCAGCTCCAAGTTTGTCATACCAAACTGTACCCCAGCAGATGGCTCCTTCAATTGTTGGCTCTTCGAATTCTATCCGCACAGAACCACCTGTCCCTTCTCTGGTAACCCCAGCTCAATTATTGCAGTCTGGGCAATCTGCAGTAGCTTCATCTAAGCCTTCACAAACAGCACATAAGGATGTTGAAGTGGTTCCGGTATCATCAACTTTACCTCCAGAGCCACCTGTGTCTGTCGCTGCTGAATCCCAGCCACCGATACTTCCATTGCCTGTGACTTCACGACCAACTCACAGGCCTGGTGGAGCTTCTAGCCAAACTCCTCATGGCTATGGCTACAGGGGACGCGGAAGAGGAAGAGGAGTCCAGGGTTTCCGCCCAGCTGAAAGATTCACCGAGGACTTTGACTTCACAGCTATGAATGAGAAGTTCAAAAAGGATGAAGTATGGGGTCACCTAGGTAAAAGTAACAAGAAAGACGGGGAAGAAAATGCTAGTGATGAAGATGGAGGTCAATATGAAGACGATGGCGATGTATCAAACTTGGAGGTTAAGCCTGTTTATAACAAGGATGATTTCTTTGACTCTCTCTCCTGCAACTCACTCAATAATGATCCACAAAATGGAAGGATTAGATATTCAGACCAAATCAAGATGGATACCGAGACGTTTGGTGATTTTACGAGGCATCGTGGTGGCTGGGGTGGCCGTGGTCCATGGCGCGGTGGTGGTGGCGGACGTGCTCGAGGTGGTGGTTTTTATGGAAGGGGGTATGGCTATGGTGGTGGAAGAGGAAGAGGTGGACGTGGCATGTCTGGCGGTCGTTTTTAG 1911 0.483 MASDTASRSSSAADSYIGCLISLTSKSEIRYEGVLYNINTDESSIGLKNVRSFGTEGRKKDGPQILPGDKVYEYILFRGTDIKDLQVKSSPPVQPTAPTNTDPAIIQSQYPRLATTSTSLPAASGSLTDASPHTTQLGHPGSNFQGPLYQPGGNVVSWGASSPSPNVNGGGLAMPMYWQGYYGAPNGLPQLHQQSLLRPPGLSMPSSMQQPMHSSMQQPMPPSLQQHMPSSMQQPLPSSMQQPLPSSMQQPLQYPNFSPSLPTGPSNFPEFPSAFLPVGTSSPNITATSAPPSNLPTTVSPPAPLATLAPETFQVSVPNKAPSVSLPAVTLGANLSSLASFTNGGHDMSASVAMANKPNAISAPSLSYQTVPQQMAPSIVGSSNSIRTEPPVPSLVTPAQLLQSGQSAVASSKPSQTAHKDVEVVPVSSTLPPEPPVSVAAESQPPILPLPVTSRPTHRPGGASSQTPHGYGYRGRGRGRGVQGFRPAERFTEDFDFTAMNEKFKKDEVWGHLGKSNKKDGEENASDEDGGQYEDDGDVSNLEVKPVYNKDDFFDSLSCNSLNNDPQNGRIRYSDQIKMDTETFGDFTRHRGGWGGRGPWRGGGGGRARGGGFYGRGYGYGGGRGRGGRGMSGGRF* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4134 636 CDD LSm14_N 16 87 IPR025609 -
Psa6g4134 636 Gene3D - 6 92 - -
Psa6g4134 636 Pfam FDF domain 490 585 IPR019050 -
Psa6g4134 636 ProSiteProfiles DFDF domain profile. 483 519 IPR025762 -
Psa6g4134 636 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Psa6g4134 636 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Psa6g4134 636 PANTHER SCD6 PROTEIN-RELATED 5 218 - -
Psa6g4134 636 PANTHER SCD6 PROTEIN-RELATED 236 627 - -
Psa6g4134 636 MobiDBLite consensus disorder prediction 427 481 - -
Psa6g4134 636 SMART FDF_2 489 588 IPR019050 -
Psa6g4134 636 ProSiteProfiles TFG box profile. 568 588 IPR025768 -
Psa6g4134 636 ProSiteProfiles FFD box profile. 546 561 IPR025761 -
Psa6g4134 636 PANTHER PROTEIN DECAPPING 5-LIKE 5 218 - -
Psa6g4134 636 PANTHER PROTEIN DECAPPING 5-LIKE 236 627 - -
Psa6g4134 636 MobiDBLite consensus disorder prediction 205 251 - -
Psa6g4134 636 SMART LSM14_2 10 110 IPR025609 -
Psa6g4134 636 MobiDBLite consensus disorder prediction 515 541 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4134 6 363712485 363718661 Psa6g4134 6 363712485 363718661 ECH