Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3945 ATGTTCACTCTCTCTCTACTTTCTCTCTCTAAAAAAACTGACATAGAAAAACAAACACCACCTAACCTTGTTGTTGGCTTCTCTTCCATCAGCATTGCTACTAGTTCCTCCCAAACCCTCAACACGATCACAATCACCATCATGCTAGCCTTCACCTTCTCCTCATCTCTTCTCCTCCGGTTTCCTTCATTTCCCTTCCGTTTCACCTTCTCTCCCACCCATCCACCACTCCTTCACCTCCCTTCCATCAATTCCTCTTCGACCCCTTCACCGATCTGCTTTCTTCCTTCAGGAAATGGGACTCGCGAGTGGGTTGTGATAAATTCAGAGAGAAACAAATGGAGTTTTGTTGAATCACTCAAGGTTGTTTCTTGCAAGAGTTTGGTGGGTGGACTTGGATTCCTGATAATTTGGATAATTTGTATTCTTGTCGTTGTGGGTTGGTTGTTTGTGACCAAATCCAATGTTCTGCCTGATAAACCTGATGCTTTGTTGTTTGAACTTCTACGCCTCCAATTCAGAGACGTGTGGGAGAACCGCTTCCGTGCGTACATGGATCTCGAAGCTGGTCGAAAGAGATCAGGCCGAGAGGATATATACATTAGTTACCACGCTGAAGATGATGTACAGTCAACCTATGTCGGTTCCCTGTTTCACAATGGACGAAACTATCACGTCTCTAATACTAAAAACAGTGATATACTTGTTTATTGGTCTTCATCGCGGTGTCTTCCTCAAAGAAATGAACTTGCCAAGAAACTCCTCGGCTTGCTACCTAGCCCATTCATTTGGCAAGTGCCTAACAATGTCGGTGACGGGGGAGTGGGGAAAACGTATACTATGTGGGGTCCTGCCAATTCTTTGGCTGAAGAAAATGTAGCAAAAGAGCAACAAGGACTTACACCCCGTGTTTTTGAGAGACTGTTTGCGCGCATAAAGGAAGAGCAAACAAAGCATTCTGATCAACAGCTCAATTATCAGTGCAACTGCTCTTTTCTTGAGATATACAATGAACAGGTCACAGATCTGTTGGATCCGAGTCAAAGGAACCTTCAGATTAGAGAAGATGTCAAATCAGGTGTTTTTATTTACTGCACAGGAGCAAACAAAGCATTCTGA 1119 0.4388 MFTLSLLSLSKKTDIEKQTPPNLVVGFSSISIATSSSQTLNTITITIMLAFTFSSSLLLRFPSFPFRFTFSPTHPPLLHLPSINSSSTPSPICFLPSGNGTREWVVINSERNKWSFVESLKVVSCKSLVGGLGFLIIWIICILVVVGWLFVTKSNVLPDKPDALLFELLRLQFRDVWENRFRAYMDLEAGRKRSGREDIYISYHAEDDVQSTYVGSLFHNGRNYHVSNTKNSDILVYWSSSRCLPQRNELAKKLLGLLPSPFIWQVPNNVGDGGVGKTYTMWGPANSLAEENVAKEQQGLTPRVFERLFARIKEEQTKHSDQQLNYQCNCSFLEIYNEQVTDLLDPSQRNLQIREDVKSGVFIYCTGANKAF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3945 372 PANTHER KINESIN-LIKE PROTEIN 271 363 - -
Psa6g3945 372 Gene3D Kinesin motor domain 269 370 IPR036961 -
Psa6g3945 372 ProSiteProfiles Kinesin motor domain profile. 274 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3945 372 PANTHER KINESIN-RELATED 271 363 IPR027640 GO:0003777|GO:0007018
Psa6g3945 372 Pfam Kinesin motor domain 271 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g3945 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 271 363 IPR027417 -
Psa6g3945 372 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 133 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3945 Psa-Chr6 342662579 342666495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g3945 152 293 Xyloglucan Fucosyltransferase1 AT1G71990 57.746 7.31e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3945 K14412 K10400 gmx:100792300 175.252