Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2949 ATGTTTTCTTGGTTAGCAAGGTTAGTTTCAGCGTGCTTGAGACCAGTGAGACGGTATGCACGTATGAACAAAGATGTTGATAATGATTCTGATGGGGCTTCAACAACTGGTGATGCCCTTGTTTGGTGTAAGGATCTTGAGAAACACTCGTGTGGTGAATTCTCGTTTGCTGTTGTTCAGGCTAATGAGGTTATTGAAGATCATAGCCAAGTTGAAACTGGTTCTGATGCTGTTTTTATTGGTGTTTATGATGGACATGGTGGTGCTGACGCTTCTCGGTTTGTCAATGATCATCTCTTTCATCATCTCATCAGGATTGCTCAAGAAAACGGTTCTATCTCCGAAGATATTATAAGGAATGCTGTTTCTGCTACGGAGGACGGATTTCTAACTCTTGTTCGCAGGAGTTTTGAAATAAAGCCACTGATAGCAGCAATGGGTTCATGTTGTCTTGTCGGTGTTATCTGGAAAGGAACATTATATATCGCTAATCTTGGAGACTCTCGTGCTGTGATCGGTTCAACAGGCGGAACATCTAAGAAGATTGTTGCTGAACAGTTGACCAAAGAGCATAATGCCTCCAAAGAGGAAATCCGAAGAGAACTCAGGAATTTGCATCCAGAAGATTCGCAGATTGTAATTATGAAGCATGGAACATGGCGTGTTAAAGGCATCATCCAGGTATCAAGATCTATAGGTGATGCATATTTGAAGCGGCCGGAGTTCTCCTTTGATCCTTCATTCCCACGGTTCCACTTGCCTGATCCTATCCGCCAACCAGTTCTTTCAGCCGAACCATCTATTTGTTCAAGAGTTTTACAACCGAACGATGAATTTGTTATATTTGCATCTGATGGCCTTTGGGAACACATGACAAATCAGGAAGCTGCTGAGATTGTTCATAAAAGCCCTAGAAATGGGAGTGCAAGAAGACTTCTTCAGGCTGCATTGACTGAGGCGGCGAGGAAAAGAGAAATGAGATATAAAGATATGCAGAAAGTTGAAAAAGGGATTCGGCGTTTTTTCCACGATGATATCACAGTGATTGTTATCTTCATCGACCATGAGTTGCAAAATAAGAATGCTGATGTTCCTGAGTTGTCCATCAAAGGGTTTATCGACACAGTTGGAACATCGAAGTTTAGAAGTTTCCAAGAAATGCAATGA 1167 0.419 MFSWLARLVSACLRPVRRYARMNKDVDNDSDGASTTGDALVWCKDLEKHSCGEFSFAVVQANEVIEDHSQVETGSDAVFIGVYDGHGGADASRFVNDHLFHHLIRIAQENGSISEDIIRNAVSATEDGFLTLVRRSFEIKPLIAAMGSCCLVGVIWKGTLYIANLGDSRAVIGSTGGTSKKIVAEQLTKEHNASKEEIRRELRNLHPEDSQIVIMKHGTWRVKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPDPIRQPVLSAEPSICSRVLQPNDEFVIFASDGLWEHMTNQEAAEIVHKSPRNGSARRLLQAALTEAARKREMRYKDMQKVEKGIRRFFHDDITVIVIFIDHELQNKNADVPELSIKGFIDTVGTSKFRSFQEMQ* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2949 388 PANTHER ALPHABET, ISOFORM E-RELATED 6 373 - -
Psa6g2949 388 SMART PP2C_4 47 351 IPR001932 -
Psa6g2949 388 CDD PP2Cc 54 353 IPR001932 -
Psa6g2949 388 Coils Coil 184 204 - -
Psa6g2949 388 Gene3D - 35 364 IPR036457 -
Psa6g2949 388 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 373 - -
Psa6g2949 388 Pfam Protein phosphatase 2C 67 322 IPR001932 -
Psa6g2949 388 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Psa6g2949 388 ProSiteProfiles PPM-type phosphatase domain profile. 53 353 IPR001932 -
Psa6g2949 388 SUPERFAMILY PP2C-like 59 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2949 Psa-Chr6 246722073 246725045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2949 1 384 PP2C-type Phosphatase Gene Family AT5G06750 68.031 0.0 542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2949 6 246722073 246725045 Psa6g2949 6 246722073 246725045 ECH